CI01000006_11436920_11440304


Basic Information

Item Value
gene id CI01000006_11436920_11440304
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 11436920 ~ 11440304 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_11436920_11440304.mRNA
TGATCTCCTATCATGACGTTGATGAAGAAATCGACCATCTGTCCTCTTTCATTGCCAAGCAGCAAATGTCAGAAGTCAAGCAGCCAGAGTCTCCTCTACAATCCCGGTCAGAATCGAAGCAGAAGAGTCTGCCCAAACCCACAACCATAGAACTAACAACCAGCAGCCCATCGACACCACAACACCACACTCCTAAATCTCCCCAGCCAATCACAAACTCGTCCGATCGTCATGGGCCGATCGCTTCCCCCAACACTTCCAGAGACAGCCTGCTATCTGGGGATAAAACACTGGCTCACAATGCTCAGATGTATCACTACCAGCATCAGAAACAACAGATGCTCTCAATGGAGAAACATAAAGCAGAACCTAAAGTCTCAGAGTCTGGGGCCACATCAGATGAGGAGAATGAAGAGGGAGATTTCACTGTGTATGAGTGCCCTGGACTGGCACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_11436920_11440304.mRNA False 455 mRNA 0.49 4 11436920 11440304

Neighbor

gene id symbol gene type direction distance location
CI01000006_11429439_11432136 NA coding upstream 4674 11428774 ~ 11432797 (+)
CI01000006_11395393_11412606 NA coding upstream 24314 11395123 ~ 11412606 (+)
CI01000006_11362605_11384441 NA coding upstream 51833 11362605 ~ 11385087 (+)
CI01000006_11298514_11313005 NA coding upstream 123535 11298372 ~ 11313385 (+)
CI01000006_11178091_11284993 DFNB31, DFNB31A, WHRN coding upstream 151889 11177136 ~ 11285031 (+)
CI01000006_11452997_11455817 POU5F3 coding downstream 11937 11452241 ~ 11456562 (+)
CI01000006_11469982_11473164 CLIC4, CLIC3 coding downstream 28825 11469129 ~ 11473627 (+)
CI01000006_11476139_11503761 PNPLA7 coding downstream 35835 11476139 ~ 11504598 (+)
CI01000006_11546432_11575289 NSMFA coding downstream 106128 11546432 ~ 11575476 (+)
CI01000006_11704767_11714559 WDR34 coding downstream 264463 11704767 ~ 11714661 (+)
G47299 NA non-coding upstream 21216 11415438 ~ 11415704 (+)
G47298 NA non-coding upstream 21741 11414756 ~ 11415179 (+)
G47163 NA non-coding upstream 43970 11387203 ~ 11392950 (+)
G47164 NA non-coding upstream 115250 11314523 ~ 11321670 (+)
G47315 NA non-coding downstream 86484 11526788 ~ 11527016 (+)
G47362 NA non-coding downstream 228070 11668374 ~ 11668589 (+)
G47368 NA non-coding downstream 244331 11684635 ~ 11684975 (+)
G47333 NA non-coding downstream 274382 11714686 ~ 11720080 (+)
G47390 NA non-coding downstream 349907 11790211 ~ 11790433 (+)
G47145 NA other upstream 925114 10485358 ~ 10511806 (+)
G46652 NA other upstream 1277669 10156579 ~ 10159251 (+)
G45416 NA other upstream 2602223 8818814 ~ 8834697 (+)
G45355 NA other upstream 3224532 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 3236775 8197881 ~ 8200145 (+)
G47318 NA other downstream 183963 11624267 ~ 11638252 (+)
G48094 NA other downstream 837316 12277620 ~ 12279541 (+)
G48081 NA other downstream 936702 12377006 ~ 12384827 (+)

Expression


Co-expression Network