CI01000006_11596063_11609407


Basic Information

Item Value
gene id CI01000006_11596063_11609407
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 11595639 ~ 11609407 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_11596063_11609407.mRNA
ATGGGTAAATTTGAAATTGGATATAACTCCGACAACAAAGGAGAATATGCAGATGAGATATCTAAGATGTGTGAGGTAGATGAGACTCCGGAACCGGTCAGTCCCACGCTGCTCAGCGAGTCCACAGACACCTACTGTCAGGCCGACTGCTGGCAGCCACTCCGCACCACCGTCCGCAAGCTGGAATTCTGGGATGACTTCAGCGCAGAGCTTATCGGAACCGGCTTCTTCTCGAAGGTCTACAAGGTGATGCACAGCACTACAAAAAAGGTGATGGTGGTGAAGATCTATAAGAATGACGTGGATCAGAACAGCATTGTGAGGGAGATCAGTCTACTTCAGAAACTCTCCCACCCGAACATTGTGAGGTACATGGGGATCTGTGTCAAGGAGAATAAGCTGTACCCAATTCTCGAGTATGTTAGCGGAGGCTGTCTGGAGGAGCTGCTGGCCAGGGATGACGTCAGCCTCTGCTGGAGGGAGAAGATCGAACTGGGCTGCGATATCAGCCGAGGAATGACCTACCTCCACTACAAGAACATCTACCACAGAGACCTCAACTCTAAGAACTGTCTCATCCGTGTGACCTCACGTGGCAGAGAGGCCGTGGTCACTGACTTCGGGCTGGCCAGAGAGGTGGGGGAGCTGCCCGCTAATGACCCAGACAGGAAGTTGTCTCTGGTGGGGTCGGCCTTCTGGATGGCCCCTGAAATGCTTAGAGGAGAGCCGTATGATCGCAAGGTTGATGTCTTTTCTTTCGGGATCATGTTGTGTGAGATCTTAGCAAGAATCCCTGCCGACCCAGAGGTGCTGCCCAGGACGCAGGACTATGGGCTAAATGTGGAATCGTTCAGAGAGCTGGTGCACGGCTGCCCAGAGCGGGTTCTGGAGCTGTCGGCCAGCTGTTGCCAGATGGATGCATTTCGAAGACCTTCCTTCTCTGAGCTGCTGGATGAACTGGAGGACATCGCCGAGACCCTAGAGCCACCAGACAACAACCTAACCACAGGAGTAGAACATACAGGGGAATGTCTGGTAATTGAGGACAAAACCACTCAACTGAATGTTCACTCAATAACCAGTTCTGGACGCCCTGCCTGCAGAGTGACACTGAACGATTGCGAGAGGCTGAATTTTGCCAGATAGATGAAAGTAACATGATTCTTTAGGGACCAACTTGTCATCTTTTTTTAAAAAAAGACCAAATTCCCTTGATTCCTTTATTGAAGGTTTCAGGAAAATACAATATGAGCTTACTTTTTTATACAGTTTAATATAAGTATATAGCAATGGTTGCACAAACCTGGAACAAACCAAACTAGAGAAATTAAGGTGTGCTAGATTAGAAAAAAAAAAAGCATATCCCGTCAGTGCATTTACAAGTACCAAGTAATTCCTTAGTTGATGTCACCTGTTTTTTGCCTTGTTGCACTTTCCATGTCACTCATTTTCCCAGTGTTAGCATCTGTCAGATTGATGGAGCTCTAAAATTAAACTCAACATTGTGGTCGTAGAACATGCATAGAGATGCATTGCTTACACATAAATACATAGTGTATTTCTGAATAAA

Function

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_11596063_11609407.mRNA True 1570 mRNA 0.47 10 11595639 11609407

Neighbor

gene id symbol gene type direction distance location
CI01000006_11530728_11535297 NA coding downstream 59739 11530366 ~ 11535900 (-)
CI01000006_11459706_11462546 NA coding downstream 133034 11459288 ~ 11462605 (-)
CI01000006_11388077_11391485 NA coding downstream 204154 11387494 ~ 11391485 (-)
CI01000006_11320839_11338355 STXBP1, STXBP1A coding downstream 257284 11320462 ~ 11338355 (-)
CI01000006_10676705_10699710 NA coding downstream 895757 10676367 ~ 10699882 (-)
CI01000006_11627878_11631177 NA coding upstream 17787 11627194 ~ 11631177 (-)
CI01000006_11636228_11638176 CAMKK2 coding upstream 26821 11636228 ~ 11638176 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 coding upstream 41506 11650363 ~ 11654424 (-)
CI01000006_11659293_11664444 ADORA2AB coding upstream 49526 11658933 ~ 11666250 (-)
CI01000006_11672314_11695885 SPECC1L, SPECC1LB coding upstream 62447 11671854 ~ 11695920 (-)
G47812 NA non-coding downstream 90677 11503578 ~ 11504962 (-)
G47806 NA non-coding downstream 113138 11479106 ~ 11482501 (-)
G47758 NA non-coding downstream 303158 11287635 ~ 11292481 (-)
G47681 NA non-coding downstream 480128 11111614 ~ 11115511 (-)
G47673 NA non-coding downstream 526591 11063673 ~ 11069048 (-)
G47853 NA non-coding upstream 31022 11640429 ~ 11641264 (-)
G47854 NA non-coding upstream 36120 11645527 ~ 11648165 (-)
G47705 NA non-coding upstream 95520 11704927 ~ 11708257 (-)
G47861 NA non-coding upstream 155827 11765234 ~ 11765587 (-)
G47863 NA non-coding upstream 160531 11769938 ~ 11770242 (-)
G47658 NA other downstream 562512 11030911 ~ 11033127 (-)
CI01000006_10453630_10483241 NA other downstream 1107204 10453613 ~ 10484006 (-)
CI01000006_07500281_07507754 NA other downstream 4084683 7500246 ~ 7507976 (-)
CI01000006_06974359_06976736 NA other downstream 4618767 6973224 ~ 6976872 (-)
CI01000006_04560607_04560993 NA other downstream 7033571 4559509 ~ 4562068 (-)
CI01000006_12348300_12348961 GLRX other upstream 725002 12347180 ~ 12349383 (-)
CI01000006_12569291_12581457 CELL, CEL.2, CEL.1 other upstream 741352 12569205 ~ 12582487 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location