CI01000006_11627878_11631177


Basic Information

Item Value
gene id CI01000006_11627878_11631177
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 11627194 ~ 11631177 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_11627878_11631177.mRNA
GTGCTGGATGATCCAAGTGAGGACCATCTGTACATGGTATTTGAGCTCGTCAAACGAGGAGCAGTGATGGAGGTTCCTACTGATAAGCCCCTGGATGAGGACCAGGCACGCTTCTACTTCCAGGACTTGTTGAGAGGAATCGAATATTTACATTATCAGAAAATCATCCATCGGGACATCAAGCCTTCCAACCTGCTGGTGGGAGAAGATGGCCACGTTAAGATTGCCGACTTTGGGGTCAGTAACCAGTTTGAGGGAGCGGACGCCCTGCTGACCAGCACAGTGGGAACGCCAGCATTTCTTGCCCCAGAGACCCTTTCAGAGACACGCAAGAACTTCTCTGGAAAGGCTCTGGATGTGTGGGCAATGGGAGTCACCTTGTATTGTTTCATCTTTGGAGTGGTGCACCCATGGGTGACGCGGCACGGCGCTGAGCCCCTCCCTCCCGAGGACGACAACTGCTGCAGCCTGATAGAAGTGACAGAGGAGGAGGTGGAAAACTCTGTCAAGCACATCCCCAGCCTGGCCACCGTGATCTTGGTTAGGACTATGTTGCGCAAGCGTTCTTTTGGAAACCCTTTTGATTGGGGCCGCAGGGAAGACAGAAGTCCCGCCACACCAGGACACGTGCTATCGTAAGTCTTCCTCATTAGGGATGGGCTATAACTGGAACAGACTTCCTGAACATAGACTTGGATTTCTGCAGTGGTTTCAGTGATCATTGAAATGGTTTGTGTAGCTGGTTTGACAGTAATTTAATTGAACCTACTAGTATAGATGTACTTTAAACAATGCTATGTCACTACACTAGGTCCTACTGTAATAGTATAATGATAAAGCGTAAATGTATTTTCAGGTTAAATAGAGTTTAATATCTATGCACAGCATTTCCACAGAAAATAATTTCGACTACTTTCTCAATTCCTTAAATACAATCGAAAAATGTGTTTATAGTAATGCACCTAAAATGTAAGCCTATCCTTTAAAATATTTTTATTCAGCAAGGATGCATTTAAATTGATCAGAAGTCACAGTAAAGACATTTATAATGTTTCTATTTCCATTTCAAATAAATGCTGTTTTTTTTACTTACTATTCATAAAAGAATTCTGGGAAAAAAGTATCAAATATGAAGAAGGACAACTGTTTTCAACATTGATGATAATAATAAGAAATGATTCTCTAACACAAAATCAACATATTAGAATGATTTCTGAAGGATCATGTGATTTCTGGAGTAGTTGCTGCTGAAAATTCAGCTTTGCATCACAGGAATTAATTAAATTTTAAAATAAAAAAATGGTTATTTTCTCAATTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_11627878_11631177.mRNA True 1323 mRNA 0.41 7 11627194 11631177

Neighbor

gene id symbol gene type direction distance location
CI01000006_11596063_11609407 NA coding downstream 17787 11595639 ~ 11609407 (-)
CI01000006_11530728_11535297 NA coding downstream 91294 11530366 ~ 11535900 (-)
CI01000006_11459706_11462546 NA coding downstream 164589 11459288 ~ 11462605 (-)
CI01000006_11388077_11391485 NA coding downstream 235709 11387494 ~ 11391485 (-)
CI01000006_11320839_11338355 STXBP1, STXBP1A coding downstream 288839 11320462 ~ 11338355 (-)
CI01000006_11636228_11638176 CAMKK2 coding upstream 5051 11636228 ~ 11638176 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 coding upstream 19736 11650363 ~ 11654424 (-)
CI01000006_11659293_11664444 ADORA2AB coding upstream 27756 11658933 ~ 11666250 (-)
CI01000006_11672314_11695885 SPECC1L, SPECC1LB coding upstream 40677 11671854 ~ 11695920 (-)
CI01000006_11715016_11740679 SPTAN1, SPNA2 coding upstream 83528 11714705 ~ 11740763 (-)
G47812 NA non-coding downstream 122232 11503578 ~ 11504962 (-)
G47806 NA non-coding downstream 144693 11479106 ~ 11482501 (-)
G47758 NA non-coding downstream 334713 11287635 ~ 11292481 (-)
G47681 NA non-coding downstream 511683 11111614 ~ 11115511 (-)
G47673 NA non-coding downstream 558146 11063673 ~ 11069048 (-)
G47853 NA non-coding upstream 9252 11640429 ~ 11641264 (-)
G47854 NA non-coding upstream 14350 11645527 ~ 11648165 (-)
G47705 NA non-coding upstream 73750 11704927 ~ 11708257 (-)
G47861 NA non-coding upstream 134057 11765234 ~ 11765587 (-)
G47863 NA non-coding upstream 138761 11769938 ~ 11770242 (-)
G47658 NA other downstream 594067 11030911 ~ 11033127 (-)
CI01000006_10453630_10483241 NA other downstream 1138759 10453613 ~ 10484006 (-)
CI01000006_07500281_07507754 NA other downstream 4116238 7500246 ~ 7507976 (-)
CI01000006_06974359_06976736 NA other downstream 4650322 6973224 ~ 6976872 (-)
CI01000006_04560607_04560993 NA other downstream 7065126 4559509 ~ 4562068 (-)
CI01000006_12348300_12348961 GLRX other upstream 703232 12347180 ~ 12349383 (-)
CI01000006_12569291_12581457 CELL, CEL.2, CEL.1 other upstream 719582 12569205 ~ 12582487 (-)

Expression


Co-expression Network