CI01000006_12348300_12348961 (GLRX)


Basic Information

Item Value
gene id CI01000006_12348300_12348961
gene name GLRX
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 12347180 ~ 12349383 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_12348300_12348961.mRNA
AGTGCCGCTCCGACTTTTGTACAGACTCAAAACACCTGTTCACAGTGAAGGGGGCGTATCGGTTCATATACCCAAATTATATATTCGTTCACAGTCCACTCCACACTCGAATCCTGTTGGTTCATGCCTTCGTCAGTCTTTGAAGTCAGGGGAGCGGTCATATGGTCTAAAAGGAGACATCCGTGAACAAAAGTGAAAGAATACGATCGCTACACATAACTCCACCCAGAGCCGTTGAAAATATTTAACGGCTCTGACTCCACCCATTAGGTCCACAGAGGTGGAGCTGGACGTCATATGGCTCTGCGGTTGCGGTGAGCACCACTTCAAGGAAAGCGATTCACAAATCCCGGAAAGAATAGTTTCTTTTTCAACGAGGCTGACTCTAGTGGTGAACAGCTGTACTTTTTACGTCACGAACAATGGCAGAATTTGTTAAAGCTCAAATTAAGGGTGATAAAGTAGTTGTGTTTTTGAAGCCGTCTTGTCCTTACTGCGTACTGGCGAAGGATGTTTTGTCGAAGTATAGATTCAAAGATGGACAGCTGAACTTGGTCGATATCAGCGGACGCAGTGACACGGGCAGTATACAAGACTATCTGCAACAGATCACAGGCGCGCGCACCGTTCCTCGAGTCTTCATAGGGGAAAAGTGTATTGGAGGAGGAAGTGATGTCGAAAGTCTTGACCGTTCTGGAGCTCTGGAAGGCATGTTGCAGGCAATCGGATCTCTGCAGTGAGGGTATACTTCACAGTTCTTCTATTGTAAACAATATACAACATAATTATACCAGTGCTTCTCAACTGGTTTTGCTTTAGGGCCAAGATTTGACATTGGACGTGGCCATTGTGCCAAAATTGTGTATTGTACACAAAAATATCCTTAAAATGTTTTCAAAAACTGCCTTTTCCCTCACCAGCCAGTAATTATGTTTCACTAAACACATCATGGTCAGCACAAAACATATTTGTCCATGCAGTCTGGCTCCAGTGTTATGAGATTATGGTTATTAGTATTTTGAAAAAACCTGTCTGGCTCACAGTGTCTTTTAGCCTTCATCTACAGTAGCATTGTTTTTCTGATCTATATAAAATACATTTAATGACACATTATTACATTATTAATGTCATTTATATAGATCAGTGGTCACCACCCACCCGTTGAGAACAGCTGGTTAAGATTTAAAGGGATAGTTCAGCCAAAAATGAAAATTATCCCATCTTTTTTCAGACGAACACAATTGAAGGTATATTTAAAAATATCCTGGCTCTTCCAAGCCTTATTATGGTAGTGAATGGGGGGTGAGATTTTGAAGCTCAAAAAAATGCATCCATCCATCATAAAAATAATTCATACGGCTGCTGGAAGCTAGTTATTTTAGTTTATAAAGTTTTAAATATGGATATTTTTCTTACAAAACCCATCACTTCACTTCAGAAGGCCTTAATTAACCCCCTGGAGCAGTATGGATTATTTTTATGATTGATGGATGCATTTTTTGGGGCTTCAAAATCTCGCCCCCCATTCACTACCATTATAAAGCTTGGAAGAGCCAGGATATTTTTGAATATATCTTCGATTGTGTTTGTCTGAGAGAAGATAGTCATATACACCTAGGATAGCTTGAGGGTGAGTAAATCATGGGATAATTTTCATTTTTTGGCTGAACTATCCATTTAAGTCACAGACTCTGAGAACAAACACGCATCCTTCTAAAATGTCTTTATTCAGCATAAGATGAGGGTCAACAGAACTGGATTAGACTAAAGACAGCCAGAATCTACGTCGACCACACCAACTGCACTAACAGGCGATCCACATGCTGGATGCGTACTTTGTACGTTATTAGTTGAAATAAA

Function

symbol description
glrx Predicted to enable electron transfer activity; protein-disulfide reductase activity; and transferase activity. Orthologous to human GLRX (glutaredoxin).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K03676 grxC, GLRX, GLRX2; glutaredoxin 3

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_12348300_12348961.mRNA False 1860 mRNA 0.40 2 12347180 12349383

Neighbor

gene id symbol gene type direction distance location
CI01000006_12309164_12310107 NUDT2 coding downstream 37073 12307563 ~ 12310107 (-)
CI01000006_12289635_12293874 UBAP1 coding downstream 53306 12289515 ~ 12293874 (-)
CI01000006_12274550_12280868 DCAF12 coding downstream 66312 12273081 ~ 12280868 (-)
CI01000006_12252567_12267751 UBAP2, UBAP2A coding downstream 79429 12251931 ~ 12267751 (-)
CI01000006_12238313_12238815 NA coding downstream 108129 12238313 ~ 12239051 (-)
CI01000006_12352899_12370703 ELL2 coding upstream 3255 12352638 ~ 12370703 (-)
CI01000006_12380830_12394437 PCSK1 coding upstream 31082 12380465 ~ 12394437 (-)
CI01000006_12468191_12470593 NA coding upstream 118262 12467645 ~ 12471559 (-)
CI01000006_12479463_12483283 NA coding upstream 129025 12478408 ~ 12483283 (-)
CI01000006_12490152_12496647 NA coding upstream 140116 12489499 ~ 12496647 (-)
G48422 NA non-coding downstream 168986 12171561 ~ 12178194 (-)
G48490 NA non-coding downstream 187097 12159558 ~ 12160083 (-)
G48413 NA non-coding downstream 264553 12082243 ~ 12082627 (-)
G48393 NA non-coding downstream 295496 12051341 ~ 12051684 (-)
G48385 NA non-coding downstream 303416 12043548 ~ 12043764 (-)
G48459 NA non-coding upstream 113021 12462404 ~ 12463511 (-)
G48571 NA non-coding upstream 304246 12653629 ~ 12653890 (-)
G48576 NA non-coding upstream 350089 12699472 ~ 12699782 (-)
G48577 NA non-coding upstream 350686 12700069 ~ 12700268 (-)
G48578 NA non-coding upstream 352207 12701590 ~ 12701857 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other downstream 692773 11650363 ~ 11654424 (-)
G47658 NA other downstream 1314053 11030911 ~ 11033127 (-)
CI01000006_10453630_10483241 NA other downstream 1858745 10453613 ~ 10484006 (-)
CI01000006_07500281_07507754 NA other downstream 4836224 7500246 ~ 7507976 (-)
CI01000006_06974359_06976736 NA other downstream 5370308 6973224 ~ 6976872 (-)
CI01000006_12569291_12581457 CELL, CEL.2, CEL.1 other upstream 1376 12569205 ~ 12582487 (-)

Expression


Co-expression Network