LOC103023731


Basic Information

Item Value
gene id LOC103023731
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 11382793 ~ 11383625 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>LOC103023731
CTACTTTGCACTTGTTATTAACGCTTCAGAAGAGCCAGAATGCTGACTGATATCCAGGAAATGACATCACTGTGTCACAGATGGGAGGTTTTCATTACTGATAACACACTGCCGCTTTAATGAAACAGTTGAGTTGAGGAGCAGGTGAGAGAACtatataaaacacagaactCTCTTAAGTTCTTAAGTAAATGAAAGATGAATGTAGAACTCTATGCTGTTCTCTTCTCACTGGCTGTAGTGGGTGTACTTGGACAAACTGTGGAGCAAACTGAGCTCTTTTGGACAAAGTCACTGAATAAGAGAGCTTATATCAGCTGTAAAGTGACTGGTCTTCAGAGCAACAACTACGTCCACTGGTATCAACAGAAAGGTGGAGAAGCTCTAAAAAGGATCCTGTACGTTAATAAAGATGCCTCTAGCACTGTTCGTGATCCAAACCATCCTGAAGCAAAAGACTTCTCTGTGACTCCAGAGAAGGGTGATGCAGGTGATAATTATGTTCTGAAGGTGGGCTCAGTGAAGCTCAACCATGCTGGAGTTTATTACTGCGCTGTCTGGGACTGGAGCTCAAGCAGCCACAGTGAGATAAACTGCTCACATCCTGTACAATAACTACTGTAACTCTGCCAGTGTTCAACCTGAAAGTTGCACAGCACAATCAAATCCATTTTAGGggaacactttataatact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC103023731 True 695 V_segment 0.42 2 11382793 11383625

Neighbor

gene id symbol gene type direction distance location
LOC107196916 NA coding upstream 84 11381709 ~ 11382709 (+)
LOC103029510 NA coding upstream 1773 11379982 ~ 11381020 (+)
LOC103029197 NA coding upstream 3934 11378122 ~ 11378859 (+)
LOC103039371 NA coding upstream 11695 11344591 ~ 11371098 (+)
LOC103039058 NA coding upstream 44311 11337961 ~ 11338482 (+)
LOC111194233 NA coding downstream 11480 11395105 ~ 11395623 (+)
LOC111194199 NA coding downstream 14656 11398281 ~ 11399003 (+)
LOC111194198 NA coding downstream 17012 11400637 ~ 11401370 (+)
LOC103029835 NA coding downstream 21799 11405424 ~ 11406331 (+)
LOC111194306 NA coding downstream 34266 11417891 ~ 11426827 (+)
G140563 NA non-coding upstream 253884 11127288 ~ 11128909 (+)
G140556 NA non-coding upstream 378267 11003817 ~ 11004526 (+)
G140550 NA non-coding upstream 403703 10978574 ~ 10979090 (+)
G140543 NA non-coding upstream 433308 10949255 ~ 10949485 (+)
G140516 NA non-coding upstream 624323 10758255 ~ 10758470 (+)
G140670 NA non-coding downstream 60216 11443841 ~ 11444206 (+)
G140644 NA non-coding downstream 68394 11452019 ~ 11455807 (+)
G140671 NA non-coding downstream 70945 11454570 ~ 11454829 (+)
G140676 epdr1,LOC108437243,LOC107664036,LOC107558964,LOC107713986,LOC108267170 non-coding downstream 117431 11501056 ~ 11520012 (+)
G140637 NA non-coding downstream 123039 11506664 ~ 11513421 (+)
G140520 NA other upstream 583902 10798545 ~ 10798891 (+)
sppl2b sppl2b,sppl2,LOC107738168,LOC107591351,LOC107668984 other upstream 938253 10427266 ~ 10444540 (+)
G140402 NA other upstream 982817 10395520 ~ 10399976 (+)
G140336 prkci,LOC107659412,LOC107706387,LOC102783124 other upstream 1037322 10311100 ~ 10345471 (+)
G140262 NA other upstream 1388727 9993586 ~ 9994066 (+)
LOC111194237 NA other downstream 71860 11455485 ~ 11478740 (+)
G140931 NA other downstream 854363 12237988 ~ 12240625 (+)
G140930 NA other downstream 995371 12378996 ~ 12381554 (+)
G141086 NA other downstream 1357848 12741473 ~ 12743453 (+)
LOC103029537 adcyap1b,LOC103029537,LOC108437223,LOC107713980 other downstream 1459173 12842798 ~ 12860327 (+)

Expression


Co-expression Network