LOC103029510


Basic Information

Item Value
gene id LOC103029510
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 11379982 ~ 11381020 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>LOC103029510
TTATTATCACTTCAAAAGAGCCAGAATGCTGACTGATATCCAGGAAATGACATCACTGTGTCACAGATGGGAGGTTTTCATTACTGATAACACACTGCCGCTTTAATGAAACAGTTGAGTTGAGGAGCAGGTGAGAGAACTATATGAAACACAGAACTCTCTTAAGTTCTTAAGTAAATGAAAGATGAATGTAGAACTCTATGCTGTTCTCTTCTCACTGGCTGTAGTGGGTGTACTCGGACAAACTGTGGAGCAAACTGAACTCCTTTGGACAAAGTCACTGAATAAGAGAGCTTATATCAGCTGTAAAGTAACTGGACTTCAGAGCAGCAACTACGTCCACTGGTATCAACAGAAAGATGGAGAAGCTCTGAAAAGGATCCTGTACGTTAATAAAGATGCCTCTAGCACTGTTCGTGATCCAAACCATCCTGAAGCAAAAGACTTCTCTGTGACTCTAGAGAAGGGTGATGCAGGTGATAATTATGCTCTGAAGGTGGGCTCAATGAAGCTCAACCATGCTGGAGTTTATTACTGCGCTGTCTGGGACTGGAGCTCAAGCAGCCACAGTGAGATAAACTGCTCACATCCTGTACAATAACTACTGTAACTCTGCCAGTGTTCAACCTGAAAGTTGCACAGCACAATAAAATCCATTTTAGTattaattgtaaataaacaggCACGTCAAATTGTATATTGTGCCCACCTCCTTTTTAATGCACCCAATGTCCATTATATCAGCACCACTGttcatataggagcactttgtagttctgacCCAAAGCTGGGGTCCTgcgttcaagtccctatctgggtgaagTTGCCTTGTTCTCCTTATGCCTGTAAGGGTTTCCTCTGGGTactccagtttcctcccacagtgcAATAAAACATGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC103029510 True 901 V_segment 0.43 2 11379982 11381020

Neighbor

gene id symbol gene type direction distance location
LOC103029197 NA coding upstream 1123 11378122 ~ 11378859 (+)
LOC103039371 NA coding upstream 8884 11344591 ~ 11371098 (+)
LOC103039058 NA coding upstream 41500 11337961 ~ 11338482 (+)
LOC103038536 NA coding upstream 49322 11319770 ~ 11330660 (+)
LOC111194305 NA coding upstream 65608 11313533 ~ 11314374 (+)
LOC107196916 NA coding downstream 689 11381709 ~ 11382709 (+)
LOC103023731 NA coding downstream 1773 11382793 ~ 11383625 (+)
LOC111194233 NA coding downstream 14085 11395105 ~ 11395623 (+)
LOC111194199 NA coding downstream 17261 11398281 ~ 11399003 (+)
LOC111194198 NA coding downstream 19617 11400637 ~ 11401370 (+)
G140563 NA non-coding upstream 251073 11127288 ~ 11128909 (+)
G140556 NA non-coding upstream 375456 11003817 ~ 11004526 (+)
G140550 NA non-coding upstream 400892 10978574 ~ 10979090 (+)
G140543 NA non-coding upstream 430497 10949255 ~ 10949485 (+)
G140516 NA non-coding upstream 621512 10758255 ~ 10758470 (+)
G140670 NA non-coding downstream 62821 11443841 ~ 11444206 (+)
G140644 NA non-coding downstream 70999 11452019 ~ 11455807 (+)
G140671 NA non-coding downstream 73550 11454570 ~ 11454829 (+)
G140676 epdr1,LOC108437243,LOC107664036,LOC107558964,LOC107713986,LOC108267170 non-coding downstream 120036 11501056 ~ 11520012 (+)
G140637 NA non-coding downstream 125644 11506664 ~ 11513421 (+)
G140520 NA other upstream 581091 10798545 ~ 10798891 (+)
sppl2b sppl2b,sppl2,LOC107738168,LOC107591351,LOC107668984 other upstream 935442 10427266 ~ 10444540 (+)
G140402 NA other upstream 980006 10395520 ~ 10399976 (+)
G140336 prkci,LOC107659412,LOC107706387,LOC102783124 other upstream 1034511 10311100 ~ 10345471 (+)
G140262 NA other upstream 1385916 9993586 ~ 9994066 (+)
LOC111194237 NA other downstream 74465 11455485 ~ 11478740 (+)
G140931 NA other downstream 856968 12237988 ~ 12240625 (+)
G140930 NA other downstream 997976 12378996 ~ 12381554 (+)
G141086 NA other downstream 1360453 12741473 ~ 12743453 (+)
LOC103029537 adcyap1b,LOC103029537,LOC108437223,LOC107713980 other downstream 1461778 12842798 ~ 12860327 (+)

Expression


Co-expression Network