Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC103030487 |
| gene name | NA |
| gene type | coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 11438421 ~ 11438953 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| id | name | namespace |
|---|---|---|
| GO:0008519 | ammonium transmembrane transporter activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC103030487 | True | 453 | V_segment | 0.46 | 2 | 11438421 | 11438953 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103030163 | NA | coding | upstream | 2851 | 11433551 ~ 11435570 (+) |
| LOC111194235 | NA | coding | upstream | 9050 | 11428868 ~ 11429371 (+) |
| LOC111194306 | NA | coding | upstream | 11594 | 11417891 ~ 11426827 (+) |
| LOC103029835 | NA | coding | upstream | 32090 | 11405424 ~ 11406331 (+) |
| LOC111194198 | NA | coding | upstream | 37051 | 11400637 ~ 11401370 (+) |
| LOC111194236 | NA | coding | downstream | 11421 | 11450374 ~ 11450943 (+) |
| LOC111194307 | NA | coding | downstream | 12982 | 11451935 ~ 11452606 (+) |
| LOC103022687 | NA | coding | downstream | 42796 | 11481749 ~ 11493706 (+) |
| nol7 | NA | coding | downstream | 82487 | 11521440 ~ 11530907 (+) |
| retreg1 | fam134b | coding | downstream | 137159 | 11576112 ~ 11607386 (+) |
| G140563 | NA | non-coding | upstream | 309512 | 11127288 ~ 11128909 (+) |
| G140556 | NA | non-coding | upstream | 433895 | 11003817 ~ 11004526 (+) |
| G140550 | NA | non-coding | upstream | 459331 | 10978574 ~ 10979090 (+) |
| G140543 | NA | non-coding | upstream | 488936 | 10949255 ~ 10949485 (+) |
| G140516 | NA | non-coding | upstream | 679951 | 10758255 ~ 10758470 (+) |
| G140670 | NA | non-coding | downstream | 4888 | 11443841 ~ 11444206 (+) |
| G140644 | NA | non-coding | downstream | 13066 | 11452019 ~ 11455807 (+) |
| G140671 | NA | non-coding | downstream | 15617 | 11454570 ~ 11454829 (+) |
| G140676 | epdr1,LOC108437243,LOC107664036,LOC107558964,LOC107713986,LOC108267170 | non-coding | downstream | 62103 | 11501056 ~ 11520012 (+) |
| G140637 | NA | non-coding | downstream | 67711 | 11506664 ~ 11513421 (+) |
| G140659 | NA | other | upstream | 54916 | 11380098 ~ 11383505 (+) |
| G140520 | NA | other | upstream | 639530 | 10798545 ~ 10798891 (+) |
| sppl2b | sppl2b,sppl2,LOC107738168,LOC107591351,LOC107668984 | other | upstream | 993881 | 10427266 ~ 10444540 (+) |
| G140402 | NA | other | upstream | 1038445 | 10395520 ~ 10399976 (+) |
| G140336 | prkci,LOC107659412,LOC107706387,LOC102783124 | other | upstream | 1092950 | 10311100 ~ 10345471 (+) |
| LOC111194237 | NA | other | downstream | 16532 | 11455485 ~ 11478740 (+) |
| G140931 | NA | other | downstream | 799035 | 12237988 ~ 12240625 (+) |
| G140930 | NA | other | downstream | 940043 | 12378996 ~ 12381554 (+) |
| G141086 | NA | other | downstream | 1302520 | 12741473 ~ 12743453 (+) |
| LOC103029537 | adcyap1b,LOC103029537,LOC108437223,LOC107713980 | other | downstream | 1403845 | 12842798 ~ 12860327 (+) |
