Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC111194174 |
| gene name | NA |
| gene type | misc |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 23403688 ~ 23406894 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC111194174 | True | 527 | V_segment | 0.44 | 4 | 23403688 | 23406894 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| emilin2 | NA | coding | upstream | 113063 | 23255677 ~ 23290625 (+) |
| smchd1 | smchd1 | coding | upstream | 152942 | 23190464 ~ 23250746 (+) |
| trnaa-cgc_2 | NA | coding | upstream | 338330 | 23065287 ~ 23065358 (+) |
| trnat-cgu | NA | coding | upstream | 338589 | 23065028 ~ 23065099 (+) |
| adcyap1 | adcyap1 | coding | upstream | 381276 | 23016781 ~ 23022412 (+) |
| LOC103023765 | NA | coding | downstream | 28700 | 23435594 ~ 23442090 (+) |
| LOC103024399 | pde5a,pde5ab | coding | downstream | 165909 | 23572803 ~ 23664047 (+) |
| LOC103024717 | LOC108436153,LOC108267195,LOC107730122,LOC559800,LOC107698664,LOC107559837 | coding | downstream | 303614 | 23710508 ~ 23734928 (+) |
| LOC103035300 | cacnb2,LOC102289395 | coding | downstream | 373358 | 23780252 ~ 23905504 (+) |
| arl5b | arl5b,LOC103034648,LOC100708858,LOC107591025,LOC103373092 | coding | downstream | 539209 | 23946103 ~ 23971572 (+) |
| LOC111194185 | NA | non-coding | upstream | 9521 | 23384782 ~ 23394167 (+) |
| G143751 | NA | non-coding | upstream | 16117 | 23323312 ~ 23387571 (+) |
| LOC111194183 | NA | non-coding | upstream | 75878 | 23323922 ~ 23327810 (+) |
| G143707 | NA | non-coding | upstream | 91220 | 23307061 ~ 23312468 (+) |
| G143702 | NA | non-coding | upstream | 105298 | 23297810 ~ 23298390 (+) |
| LOC111194184 | NA | non-coding | downstream | 48879 | 23455773 ~ 23457306 (+) |
| G143776 | NA | non-coding | downstream | 69676 | 23476570 ~ 23657120 (+) |
| LOC103022725 | NA | non-coding | downstream | 111427 | 23518321 ~ 23520504 (+) |
| LOC111194207 | NA | non-coding | downstream | 117078 | 23523972 ~ 23525935 (+) |
| LOC111194209 | NA | non-coding | downstream | 119129 | 23526023 ~ 23528364 (+) |
| LOC111194251 | NA | other | upstream | 8448 | 23385168 ~ 23395240 (+) |
| G143324 | NA | other | upstream | 793241 | 22535685 ~ 22610447 (+) |
| G143182 | mlrn,LOC103039566,LOC106517213,LOC104925296,LOC105008240,LOC106578694 | other | upstream | 1495374 | 21811291 ~ 21908314 (+) |
| G143122 | LOC108436138 | other | upstream | 1756983 | 21645905 ~ 21646705 (+) |
| LOC103047556 | LOC108436107,LOC108267807 | other | upstream | 1792006 | 21598682 ~ 21611682 (+) |
| G143836 | NA | other | downstream | 421054 | 23827948 ~ 23916082 (+) |
| ppp3ca | ppp3ca,LOC103369319 | other | downstream | 1029485 | 24436379 ~ 24602402 (+) |
| G144017 | NA | other | downstream | 1300189 | 24707083 ~ 24711533 (+) |
| LOC111188189 | NA | other | downstream | 1449878 | 24856772 ~ 24876737 (+) |
| LOC111194253 | NA | other | downstream | 1486098 | 24892992 ~ 24894553 (+) |
