Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC111194235 |
| gene name | NA |
| gene type | coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 11428868 ~ 11429371 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| id | name | namespace |
|---|---|---|
| GO:0002376 | immune system process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC111194235 | True | 423 | V_segment | 0.42 | 2 | 11428868 | 11429371 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC111194306 | NA | coding | upstream | 2041 | 11417891 ~ 11426827 (+) |
| LOC103029835 | NA | coding | upstream | 22537 | 11405424 ~ 11406331 (+) |
| LOC111194198 | NA | coding | upstream | 27498 | 11400637 ~ 11401370 (+) |
| LOC111194199 | NA | coding | upstream | 29865 | 11398281 ~ 11399003 (+) |
| LOC111194233 | NA | coding | upstream | 33245 | 11395105 ~ 11395623 (+) |
| LOC103030163 | NA | coding | downstream | 4180 | 11433551 ~ 11435570 (+) |
| LOC103030487 | NA | coding | downstream | 9050 | 11438421 ~ 11438953 (+) |
| LOC111194236 | NA | coding | downstream | 21003 | 11450374 ~ 11450943 (+) |
| LOC111194307 | NA | coding | downstream | 22564 | 11451935 ~ 11452606 (+) |
| LOC103022687 | NA | coding | downstream | 52378 | 11481749 ~ 11493706 (+) |
| G140563 | NA | non-coding | upstream | 299959 | 11127288 ~ 11128909 (+) |
| G140556 | NA | non-coding | upstream | 424342 | 11003817 ~ 11004526 (+) |
| G140550 | NA | non-coding | upstream | 449778 | 10978574 ~ 10979090 (+) |
| G140543 | NA | non-coding | upstream | 479383 | 10949255 ~ 10949485 (+) |
| G140516 | NA | non-coding | upstream | 670398 | 10758255 ~ 10758470 (+) |
| G140670 | NA | non-coding | downstream | 14470 | 11443841 ~ 11444206 (+) |
| G140644 | NA | non-coding | downstream | 22648 | 11452019 ~ 11455807 (+) |
| G140671 | NA | non-coding | downstream | 25199 | 11454570 ~ 11454829 (+) |
| G140676 | epdr1,LOC108437243,LOC107664036,LOC107558964,LOC107713986,LOC108267170 | non-coding | downstream | 71685 | 11501056 ~ 11520012 (+) |
| G140637 | NA | non-coding | downstream | 77293 | 11506664 ~ 11513421 (+) |
| G140659 | NA | other | upstream | 45363 | 11380098 ~ 11383505 (+) |
| G140520 | NA | other | upstream | 629977 | 10798545 ~ 10798891 (+) |
| sppl2b | sppl2b,sppl2,LOC107738168,LOC107591351,LOC107668984 | other | upstream | 984328 | 10427266 ~ 10444540 (+) |
| G140402 | NA | other | upstream | 1028892 | 10395520 ~ 10399976 (+) |
| G140336 | prkci,LOC107659412,LOC107706387,LOC102783124 | other | upstream | 1083397 | 10311100 ~ 10345471 (+) |
| LOC111194237 | NA | other | downstream | 26114 | 11455485 ~ 11478740 (+) |
| G140931 | NA | other | downstream | 808617 | 12237988 ~ 12240625 (+) |
| G140930 | NA | other | downstream | 949625 | 12378996 ~ 12381554 (+) |
| G141086 | NA | other | downstream | 1312102 | 12741473 ~ 12743453 (+) |
| LOC103029537 | adcyap1b,LOC103029537,LOC108437223,LOC107713980 | other | downstream | 1413427 | 12842798 ~ 12860327 (+) |
