G137639 (cenpl)


Basic Information

Item Value
gene id G137639
gene name cenpl
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 175080 ~ 176638 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU186208
GGTCTCGGCGTCCTCCTCGGTTTCTGCCATCCCCAGAACAGCGGAGAACGAGACCCTGAACCCCGCCTCCAGCCCCACCTCCACGGCCACGCCCTGCTGCTTCTCGGCGATGATGAAGGCGGCGAGGCGTTTGGAGTAGAGTTTGAGCTGAGTGTGTCTGAAGAGGAACAGAGGCGTAACGTACGAGAGCTTCCACTCGCCGTCCAGCAGCAGAGCGACCTGCTCCGGATCCACCTtctcTGTAATATTATGGGATTTAGCAGCTCTTCTGCTGGTGGGGATCCTGTGGCCCAGTGTGGTGAGGTGGCCGGGGGTTTGCCAGAATAAAGACGGAGGTTCAACACAGCTTCTCCCATAACTCTTACTCCTCCTGGTTACAGGCCGGCGCACCGGAGTGTTCACCGCACTGCTCCGTCCCTCCATCTCCGAGCCGCGCATTCCAACTGCCCGCCCTCCCATCATGCACTGCGCTCT

Function

symbol description
cenpl Predicted to be located in chromosome, centromeric region and nucleus. Orthologous to human CENPL (centromere protein L).

NR:

description
PREDICTED: centromere protein L isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186208 True 474 lncRNA 0.60 3 175080 176638

Neighbor

gene id symbol gene type direction distance location
klhl20 klhl20 coding upstream 2031 161857 ~ 173049 (+)
LOC103047317 kif2c coding upstream 88969 75683 ~ 86111 (+)
LOC103023540 kiss1ra,LOC108411985,LOC107657423,LOC107599909,LOC107722062 coding upstream 134332 31377 ~ 40748 (+)
dars2 LOC104960769,LOC104948518 coding downstream 1025 177663 ~ 192997 (+)
astn1 astn1 coding downstream 262060 438698 ~ 694723 (+)
tnr tnr,LOC107658355 coding downstream 638200 814838 ~ 969334 (+)
kiaa0040 kiaa0040 coding downstream 809783 986421 ~ 987706 (+)
cacybp NA coding downstream 864252 1040890 ~ 1044717 (+)
G137629 NA non-coding upstream 44841 127102 ~ 130239 (+)
G137630 NA non-coding upstream 46381 128168 ~ 128699 (+)
G137596 NA non-coding upstream 106218 55706 ~ 68862 (+)
G137627 NA non-coding downstream 16671 193309 ~ 193938 (+)
G137669 NA non-coding downstream 167230 343868 ~ 357819 (+)
G137670 NA non-coding downstream 170087 346725 ~ 354561 (+)
G137725 NA non-coding downstream 349610 526248 ~ 527067 (+)
G137729 NA non-coding downstream 477583 654221 ~ 654449 (+)
G137614 NA other upstream 80507 93285 ~ 94573 (+)
rfwd2 rfwd2,LOC107658354 other downstream 586077 762715 ~ 781196 (+)
G137756 kiaa0040 other downstream 804342 980980 ~ 988638 (+)
mrps14 mrps14 other downstream 861223 1037861 ~ 1039970 (+)
G137826 LOC108430781,LOC108267757 other downstream 1315178 1491816 ~ 1499956 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other downstream 1658839 1835477 ~ 1851313 (+)

Expression


Co-expression Network