G137737


Basic Information

Item Value
gene id G137737
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 749841 ~ 750410 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU186362
CACGGGGTTCACCCTCAGCTGCTCCTTTTGGCCGCTGAAGTAGAGGGCTGTCATCCACTTAAGAGGAAGGTCCTGGACCACTGCCCCCCATCGCTCTGCTGCTCCTTGACCAGCTTGGCCCTCCTGTTCGCCTGAGTAGTCCGAGCCCCCCTCAGAGCTGCGAACATCATTCTCCAACTCAGGGTCACCTGGATGCACCTTTGAGTCACTGTGGATTTCTGCTGGACTTCGAGGAACTCTTTTCGCTGAAGGGAAGCTGTCCACTCCAACGCCTCTTGCTTCCCTCAGTTGGGACAACCTGTGAACTCTACTGTCTAATGTTTTACCATTCCAAACTCTGCTCAGTCCTCTGGACACGGTGTAAGATTTAGTGGTAGAAGAGTTGGGGTCAGCAGAGTCCGGACTTTTATTCCTTTTGCGTTTCAAGCGGGATCTCCATGcacccatcatccatccatcagctTTATGATCTGATTTATAGGGTCTTTTTTGCAACCCTTTTTGGCTCTCCCATGAAGGTCCATCATGCATCCCGTCCAGGTTGCATCCTCCCGAGCAGGAGGACCTTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186362 True 570 lncRNA 0.53 1 749841 750410

Neighbor

gene id symbol gene type direction distance location
astn1 astn1 coding upstream 55118 438698 ~ 694723 (+)
dars2 LOC104960769,LOC104948518 coding upstream 556844 177663 ~ 192997 (+)
klhl20 klhl20 coding upstream 576792 161857 ~ 173049 (+)
LOC103047317 kif2c coding upstream 663730 75683 ~ 86111 (+)
LOC103023540 kiss1ra,LOC108411985,LOC107657423,LOC107599909,LOC107722062 coding upstream 709093 31377 ~ 40748 (+)
tnr tnr,LOC107658355 coding downstream 64428 814838 ~ 969334 (+)
kiaa0040 kiaa0040 coding downstream 236011 986421 ~ 987706 (+)
cacybp NA coding downstream 290480 1040890 ~ 1044717 (+)
plk3 plk3,LOC107722069,LOC107563563,LOC107658359,LOC107726922 coding downstream 295857 1046267 ~ 1057525 (+)
LOC103047582 apol1,LOC107103896 coding downstream 319597 1070007 ~ 1082321 (+)
G137729 NA non-coding upstream 95392 654221 ~ 654449 (+)
G137725 NA non-coding upstream 222774 526248 ~ 527067 (+)
G137669 NA non-coding upstream 392022 343868 ~ 357819 (+)
G137670 NA non-coding upstream 395280 346725 ~ 354561 (+)
G137627 NA non-coding upstream 555903 193309 ~ 193938 (+)
G137754 NA non-coding downstream 156044 906454 ~ 1011995 (+)
LOC103021626 NA non-coding downstream 230523 980933 ~ 986154 (+)
G137782 NA non-coding downstream 350978 1101388 ~ 1226517 (+)
G137839 NA non-coding downstream 600864 1351274 ~ 1455746 (+)
G137850 NA non-coding downstream 689853 1440263 ~ 1440805 (+)
G137614 NA other upstream 655268 93285 ~ 94573 (+)
rfwd2 rfwd2,LOC107658354 other downstream 12305 762715 ~ 781196 (+)
G137756 kiaa0040 other downstream 230570 980980 ~ 988638 (+)
mrps14 mrps14 other downstream 287451 1037861 ~ 1039970 (+)
G137826 LOC108430781,LOC108267757 other downstream 741406 1491816 ~ 1499956 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other downstream 1085067 1835477 ~ 1851313 (+)

Expression


Co-expression Network