G137756 (kiaa0040)


Basic Information

Item Value
gene id G137756
gene name kiaa0040
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 980980 ~ 988638 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU186393
agagagagttacacaGAGAGAGCTTTCTCCTGCCCAGCCGTGCCAACCTGCCCACCGGCCGGCCgtgccaaaacacacacacacacacacacacacaccctgcccAGTGTGGATTAACCCTCTGAATGAAGCTGTGGGAGATACGCTGTTCCTGGAGCTGCTGAGGAGAAGGATGAGCATCGCTGTGACCAGAaaatgaaTGTCCTCATTCCATCACTTCAATGAGAGTCAAAGCAGGAGGGACTAAAATAGAGTTGGAGTCTCCAGAGGAAGTGAGACTGAAGTTGGACCAACAGCATGTGAAAAAAACGTCTTTATTGCCCAAACCAAGACATGAGATCATCAAACAGCACCAGATTTCAACATTTTAGAGGCGTGACTCTCTGTGACTCTCAGAAATaagagtttggtttggttgggctCTTTGGAGGAGCTTCTGTAAGAGCTGGAGGACACAGATTTTTGGATTTAGTCAATAGGAATCCAGGATTACGCCACTCTCTGAACCTCTACCAGCTCTGATATCTGCTATCTGATGTTTCTAGAGGGTGTTTCCCACATCAGAGGAGCTTCGAGTCTGAATCTGAGCAGAAGATTAGATTCGTACACACAGGAACACACTGGCCTTGAAGACCAAACTTTCTGTGATCTACTGATCGGAACATCCTTCCCCTGCTTTATCTCAACATACTTTCTTTCTCAGGCAGCATCTCTTTTAGTAAAGTtaatatacaattaaatacaCTTGAGTAAACCAACTACACTCCAGACTCTGAGGGTCTTCAGTGATTCTGAGGAGTTTTCCACATGTTGAATGTTTATGTATATACTCTTCAAATCACAATTTCTGGACTAAATCTAAATAGCAGAGGAAAAGCCGCCCTTGTGgaaaagactacacactgatgtgtaggatgGATTATTTCCCTCATCAGAGGAGCTGAActaagaggaggaggagcatcCAGTTAAATTCCCTTTCCTGcttgagaaaaagaagaagaagaagaagaagaagaagagtttttagtctttttttagagtttttaaactttttaaagatgttttagactttcttttagagttttttgaatttttgagttttcacactttctttaagagtttttaaacagtttctTTTAGAGtatttaggcttttttttagaacatttaggctttttttttgagtttttcgactgtttaaaaagttttgcaactttctttTAGAGTTATTAGGCTTTTTTAAGACTTATTAGACtttcttttatagtttttaatcttttttacagttttaagcCTTTCTTTTAGAGTTTTTagtctttttaaagagttttaattttttttgtttgtttgttttaacccGGGATATTTGTGTTTGGTCTGTAAATGCGTCCCGGGGCAGCGGAGGAACCTGCAGGAACTGGCTGAACAATGAAAGAGCAGATCATGGAGTTTTTTAATGACTTGTGGGGACTCGCGACCTCCAAGCACAATGAGGGAATCTACAACACGGTGTGTCTGGTGGTTCTCCTCACGCTGCCGCTGGTGGTCCTCTTCACCTCGCTGGTGGtttgctgccactgctgctgctgctgccgctcgCACGGCTGCCGGTGCTGCTGCCACCGAGAGCGTAGCGCCGTCacgagcagccaatcagaaaagagcaagaagaagaagaccaaGAAGAACGGCGGGCAGACGGAGGAGGACCTGTGGATTTCAGTAAAGACGGACCCTACGACTCCAGACCGAGTGGCCCTCACTGTGGTGTAGCTCACAGGCTTTTTACAGGCTTTATTCAGCACCAAAAATCTGTGTATATAagtttactgtataataatttaTGTCTCGTTTCTGAGGAACAAACGGTACTGATGATTGTACTGTAGTTACTTTAAATTTGACGTGcctgaaaaaagggaaaagtaaTGATGGAATGatgcaaaatccacaaaaatgctTCTTAAAAGAAGTTTCTCTATTCTCAATTTGGTCCAAATCAGTTATTTAAGCATCCTACACTCCAGACCAGCACATGCACTGTGAAGctgattttaaattaaaggagaatttacttttggtgtagtatgacataataaagagtactaactTTTGTTAAATAGATCACCTCCGCTCTTCTGCAGCTTTCCAAGATATCAAAGTAGATCCACAACTcattgctagaatccagagagccctgacatttaaaacaaggcattaataactttaaaagtgcacaaaaagcttattaaaaaccactgtttagaACCTGTAgagctagcttcagctccgggCGCTGCTATCTTATAGTAAAAAAGgcatgatcagtacagtgatggtggcgtCAAGAGATTAGGCTAAGCTATGtattgtaaaatgtgttttttaataagctttttgtgcacttttaaagttcttaatgctttgttttaaatgttaaagcTCTAGATTCTATTAATGAGGTTTGGAGCAACTTTAAGGCTGGATAAtagtgtaaaaagcaatttatctgcaAGAAAGCTGAgcaaaaagcataaaattactctttatcatgttttactacaacaaaagtccattttacactggagttcttctttaatactgtttttagtGTGAAAGcagcttagcattagcatttatcAGCAGagattattattagttaatagCTGTAGTTAGTAAATAtaatctgggtaataaatcaggttaaactgcacctgaacagccgtttacGTTTAGCTTAAAAATGCTGAGTATATTtgattttaagttgttttttgaCCCTATTTTTGAGGGTCTCCGTTTGGTTGTGAACCCGAATTTGATTACTGATTTCACACCTGCTTAAATGAACCAGATTTAGAACCTGATTTAACCGAACCAAAAAAATTGGTTAAAGACcttttaagtgtgtgtgaaaagtgtgtgtttgagtgtaagACTGTctttaacattttgaaaaagATGATTCTGAAAAGAAAATGCACTGAAACTGATAACCTTTAAAGTATTATTTGGTGCTTCGTTTTTTCAAATGATTGTATAGCAAATTTAACATAAATTTAGTTATTTACACAAATCAAATTGGTCAATTAGTTAAATTTTGTCCAGTATTGATTGTATTCTGTTTAATTCTGTTACACACAGGTTTAACTCTGTAACAGTGCTGTTTAAAATGAGAAGATTTACAGggtaaaaactgtgtaaaaactgCATCTGTGTTTAAAAATTGCTGACTGACATTCATAATACAGATATTTTCATCTGTGTGAAGGAGATTTTACATTAACACGgttcagtgtgaaaacagcttagcattagcatttagcagCAGAGATTAGCGTTAGTTTTTAATAGCGGTAGTAGTTCATTATTTGAGtgataaatcaggttaaactgcatcTGAACAGCCGAGTTTGTAtgcaggagctgcagagatgTGATGCTGTAGGTGAGAAAGGGACTGCTGTGTCTATTTTGAAAACAAAACTGatgaaataaa

Function

symbol description
kiaa0040 Predicted to be integral component of membrane.

NR:

description
uncharacterized protein KIAA0040 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186393 True 3501 TUCP 0.38 3 980980 988638

Neighbor

gene id symbol gene type direction distance location
tnr tnr,LOC107658355 coding upstream 11646 814838 ~ 969334 (+)
astn1 astn1 coding upstream 286257 438698 ~ 694723 (+)
dars2 LOC104960769,LOC104948518 coding upstream 787983 177663 ~ 192997 (+)
klhl20 klhl20 coding upstream 807931 161857 ~ 173049 (+)
LOC103047317 kif2c coding upstream 894869 75683 ~ 86111 (+)
cacybp NA coding downstream 52252 1040890 ~ 1044717 (+)
plk3 plk3,LOC107722069,LOC107563563,LOC107658359,LOC107726922 coding downstream 57629 1046267 ~ 1057525 (+)
LOC103047582 apol1,LOC107103896 coding downstream 81369 1070007 ~ 1082321 (+)
LOC103047078 NA coding downstream 96170 1084808 ~ 1089511 (+)
htr5a htr5a,htr5ab,LOC103024346,LOC108412811,LOC107684958,LOC107659435,LOC107591053,LOC107742155,LOC107598724 coding downstream 139439 1128077 ~ 1166419 (+)
G137737 NA non-coding upstream 230570 749841 ~ 750410 (+)
G137729 NA non-coding upstream 326531 654221 ~ 654449 (+)
G137725 NA non-coding upstream 453913 526248 ~ 527067 (+)
G137669 NA non-coding upstream 623161 343868 ~ 357819 (+)
G137782 NA non-coding downstream 112750 1101388 ~ 1226517 (+)
G137839 NA non-coding downstream 362636 1351274 ~ 1455746 (+)
G137850 NA non-coding downstream 451625 1440263 ~ 1440805 (+)
G137856 NA non-coding downstream 519627 1508265 ~ 1509554 (+)
G137857 NA non-coding downstream 521015 1509653 ~ 1512939 (+)
rfwd2 rfwd2,LOC107658354 other upstream 199784 762715 ~ 781196 (+)
G137614 NA other upstream 886407 93285 ~ 94573 (+)
mrps14 mrps14 other downstream 49223 1037861 ~ 1039970 (+)
G137826 LOC108430781,LOC108267757 other downstream 503178 1491816 ~ 1499956 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other downstream 846839 1835477 ~ 1851313 (+)
G137929 NA other downstream 1034117 2022755 ~ 2024386 (+)
LOC103045052 cfap57,LOC106594647 other downstream 1911837 2900475 ~ 2936129 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location