mrps14 (mrps14)


Basic Information

Item Value
gene id mrps14
gene name mrps14
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 1037861 ~ 1039970 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU186409
CAGTCCTCCCGCAGTTCTGTGCTCCAGCACGGGGTCAGAGCCGCAGGTTGAGGATGATCCGCGCGGGGTTTCGGTTCCTCCAGTCCGCCGTTCAGAACACCGGACAGGCCTGCAGAAGTCATCTGGCAGTGGTGGAGCAGGTCAGGGGGTATTATGTGGACTGGAGGATGCTGAAAGATGTGAAGAGGAGACAGATGGCGTACGATTTCTCAGACACACGACTACGAATCAACGCCGTCAGGAAGAACACTGTGTTACCCAAAGAGTTACAGATAAGGAAATCGCTGCTTTGCCTCGAGACAGCTGTCCCGTCCGCATTCGTAACAGGTGTGTGATGACCTCTCGGCCGCGGGGAGTGAAGCGCAGGTGGCGCGTGAGCCGAATCGTCTTCAGACACCTCGCCGACCACAACCAGATGTCCGGGGTACAGCGAGCTATGTGGTGAAAACCTGCAGCCTTTACAGTGGATTTACTGCAGTTTAGTGGACAGTGTGATGCTGTAGACGGGTCTGGATCAGGACTCAGAGATTAACAGTCTGACTTGTCCTTAActtgtgtaatatatataaatatatatataacattctGTTTCATTTTTCTGCCACTGAGGATATTGACCTCCAATATGTTAAAATGAGTCTGGTCAGTGTTTCATTGTttcaaatgtaataaaatgtgtacaatataaaatgtgtgaaa
>XM_022677751.1
GTCTCCGTCAGTCCTCCCGCAGTTCTGTGCTCCAGCACGGGGTCAGAGCCGCAGGTTGAGGATGATCCGCGCGGGGTTTCGGTTCCTCCAGTCCGCCGTTCAGAACACCGGACAGGCCTGCAGAAGTCATCTGGCAGTGGTGGAGCAGGTCAGGGGGTATTATGTGGACTGGAGGATGCTGAAAGATGTGAAGAGGAGACAGATGGCGTACGATTTCTCAGACACACGACTACGAATCAACGCCGTCAGGAAGAACACTGTGTTACCCAAAGAGTTACAGGAGGTAGCAGATAAGGAAATCGCTGCTTTGCCTCGAGACAGCTGTCCCGTCCGCATTCGTAACAGGTGTGTGATGACCTCTCGGCCGCGGGGAGTGAAGCGCAGGTGGCGCGTGAGCCGAATCGTCTTCAGACACCTCGCCGACCACAACCAGATGTCCGGGGTACAGCGAGCTATGTGGTGAAAACCTGCAGCCTTTACAGTGGATTTACTGCAGTTTAGTGGACAGTGTGATGCTGTAGACGGGTCTGGATCAGGACTCAGAGATTAACAGTCTGACTTGTCCTTAActtgtgtaatatatataaatatatatataacattctGTTTCATTTTTCTGCCACTGAGGATATTGACCTCCAATATGTTAAAATGAGTCTGGTCAGTGTTTCATTGTttcaaatgtaataaaatgtgtacaatataaaatgtgtgaaaatcattttttgagttgagttaaataaattgaataaataaatgaa

Function

symbol description
mrps14 Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 38. Orthologous to human MRPS14 (mitochondrial ribosomal protein S14).

NR:

description
28S ribosomal protein S14, mitochondrial

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005840 ribosome cellular_component
GO:0016787 hydrolase activity molecular_function
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02954 RP-S14, MRPS14, rpsN; small subunit ribosomal protein S14

RNA

RNA id representative length rna type GC content exon number start site end site
TU186409 False 699 TUCP 0.49 3 1037869 1039926
XM_022677751.1 True 761 mRNA 0.47 3 1037861 1039970

Neighbor

gene id symbol gene type direction distance location
kiaa0040 kiaa0040 coding upstream 50155 986421 ~ 987706 (+)
tnr tnr,LOC107658355 coding upstream 68527 814838 ~ 969334 (+)
astn1 astn1 coding upstream 343138 438698 ~ 694723 (+)
dars2 LOC104960769,LOC104948518 coding upstream 844864 177663 ~ 192997 (+)
klhl20 klhl20 coding upstream 864812 161857 ~ 173049 (+)
cacybp NA coding downstream 920 1040890 ~ 1044717 (+)
plk3 plk3,LOC107722069,LOC107563563,LOC107658359,LOC107726922 coding downstream 6297 1046267 ~ 1057525 (+)
LOC103047582 apol1,LOC107103896 coding downstream 30037 1070007 ~ 1082321 (+)
LOC103047078 NA coding downstream 44838 1084808 ~ 1089511 (+)
htr5a htr5a,htr5ab,LOC103024346,LOC108412811,LOC107684958,LOC107659435,LOC107591053,LOC107742155,LOC107598724 coding downstream 88107 1128077 ~ 1166419 (+)
G137754 NA non-coding upstream 25866 906454 ~ 1011995 (+)
LOC103021626 NA non-coding upstream 51707 980933 ~ 986154 (+)
G137737 NA non-coding upstream 287451 749841 ~ 750410 (+)
G137729 NA non-coding upstream 383412 654221 ~ 654449 (+)
G137725 NA non-coding upstream 510794 526248 ~ 527067 (+)
G137782 NA non-coding downstream 61418 1101388 ~ 1226517 (+)
G137839 NA non-coding downstream 311304 1351274 ~ 1455746 (+)
G137850 NA non-coding downstream 400293 1440263 ~ 1440805 (+)
G137856 NA non-coding downstream 468295 1508265 ~ 1509554 (+)
G137857 NA non-coding downstream 469683 1509653 ~ 1512939 (+)
G137756 kiaa0040 other upstream 49223 980980 ~ 988638 (+)
rfwd2 rfwd2,LOC107658354 other upstream 256665 762715 ~ 781196 (+)
G137614 NA other upstream 943288 93285 ~ 94573 (+)
G137826 LOC108430781,LOC108267757 other downstream 451846 1491816 ~ 1499956 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other downstream 795507 1835477 ~ 1851313 (+)
G137929 NA other downstream 982785 2022755 ~ 2024386 (+)
LOC103045052 cfap57,LOC106594647 other downstream 1860505 2900475 ~ 2936129 (+)
LOC103024858 NA other downstream 2042086 3082056 ~ 3084865 (+)

Expression


Co-expression Network