G137850


Basic Information

Item Value
gene id G137850
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 1440263 ~ 1440805 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU186520
cctgttactggcactcactcctgtaactgaaactcactcctgttactggcactcactcctgttactggcactcactcctgttaccggaactcactcctgttactggcactcactcctgttactggcactcactcctgttaccggaattcactcctgttactggcactcattcctgtaactgaaactcactcctgttactgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186520 True 201 lncRNA 0.50 3 1440263 1440805

Neighbor

gene id symbol gene type direction distance location
rbm33 rbm33 coding upstream 105070 1300585 ~ 1335193 (+)
LOC103046777 NA coding upstream 194494 1241235 ~ 1245769 (+)
insig1 LOC108412812 coding upstream 216434 1217510 ~ 1223829 (+)
htr5a htr5a,htr5ab,LOC103024346,LOC108412811,LOC107684958,LOC107659435,LOC107591053,LOC107742155,LOC107598724 coding upstream 273844 1128077 ~ 1166419 (+)
LOC103047078 NA coding upstream 350752 1084808 ~ 1089511 (+)
LOC111194186 NA coding downstream 48500 1489305 ~ 1491340 (+)
cdc73 cdc73 coding downstream 124125 1564930 ~ 1594076 (+)
LOC111194189 NA coding downstream 186150 1626955 ~ 1638255 (+)
LOC103022771 NA coding downstream 243588 1684393 ~ 1692239 (+)
LOC103022156 NA coding downstream 282730 1723535 ~ 1735903 (+)
G137782 NA non-coding upstream 213746 1101388 ~ 1226517 (+)
G137754 NA non-coding upstream 428268 906454 ~ 1011995 (+)
LOC103021626 NA non-coding upstream 454109 980933 ~ 986154 (+)
G137737 NA non-coding upstream 689853 749841 ~ 750410 (+)
G137729 NA non-coding upstream 785814 654221 ~ 654449 (+)
G137856 NA non-coding downstream 67460 1508265 ~ 1509554 (+)
G137857 NA non-coding downstream 68848 1509653 ~ 1512939 (+)
G137858 dcaf8 non-coding downstream 75674 1516479 ~ 1517928 (+)
G137833 NA non-coding downstream 83907 1524712 ~ 1531923 (+)
G137837 NA non-coding downstream 91384 1532189 ~ 1537281 (+)
mrps14 mrps14 other upstream 400293 1037861 ~ 1039970 (+)
G137756 kiaa0040 other upstream 451625 980980 ~ 988638 (+)
rfwd2 rfwd2,LOC107658354 other upstream 659067 762715 ~ 781196 (+)
G137614 NA other upstream 1345690 93285 ~ 94573 (+)
G137826 LOC108430781,LOC108267757 other downstream 51011 1491816 ~ 1499956 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other downstream 394672 1835477 ~ 1851313 (+)
G137929 NA other downstream 581950 2022755 ~ 2024386 (+)
LOC103045052 cfap57,LOC106594647 other downstream 1459670 2900475 ~ 2936129 (+)
LOC103024858 NA other downstream 1641251 3082056 ~ 3084865 (+)

Expression


Co-expression Network