G137917 (LOC108430762,LOC108267465)


Basic Information

Item Value
gene id G137917
gene name LOC108430762,LOC108267465
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 1987814 ~ 1988466 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU186605
GGAGTAATAATCCGATATTCCGTCCAGCGAGGCGCTGCCGAACGTTCCCGACAGGCGGCTCTCTCCGTCCAGCTGCCCACTGCCATAGGGCACGAAGTGGGCAAAATTTACCCCAACCAGGGGCTCCATCAGGGGCAGGAGAGAGAGCTTCTGctgCTGTTTTAAACTGGTCATCATTGGCTCTGTGGAGGAATATGAAACTTGTCTctcatcctcctccttcttcctcttcttggAGCGAGGGGCCGGGCGCTCTCCACTTTTGGGCGTCCTCTTGGTTCTCTGTTTCTTCTTGTCTGTGCCGGTAAAATCAGGATGTCCTGAGAGCTGGCTGTCCGA

Function

NR:

description
PREDICTED: histone-lysine N-methyltransferase 2C-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186605 True 339 lncRNA 0.55 2 1987814 1988466

Neighbor

gene id symbol gene type direction distance location
LOC103042278 NA coding upstream 72795 1869474 ~ 1915019 (+)
kdsr kdsr,LOC106569188,LOC102792240 coding upstream 127299 1855297 ~ 1860515 (+)
LOC103043726 LOC103043726,LOC105899208 coding upstream 170602 1810725 ~ 1817212 (+)
tsc22d2 NA coding upstream 185495 1777225 ~ 1802319 (+)
LOC111194259 NA coding upstream 241576 1740171 ~ 1746238 (+)
dpp6 LOC108430761,LOC108267703 coding downstream 113755 2102221 ~ 2230065 (+)
LOC103042593 LOC108430758 coding downstream 333572 2322038 ~ 2362870 (+)
LOC103040438 pcyt1a,LOC103040438,LOC108430756,LOC108267677,LOC107709348,LOC107671662,LOC107727528 coding downstream 407491 2395957 ~ 2405369 (+)
LOC103040954 anxa13,anxa13l,LOC103040954,LOC107727547,LOC108267681,LOC107559374 coding downstream 434442 2422908 ~ 2431028 (+)
LOC103041271 LOC108430753 coding downstream 476865 2465331 ~ 2473513 (+)
G137902 NA non-coding upstream 62959 1921553 ~ 1924855 (+)
G137831 NA non-coding upstream 69403 1916147 ~ 1918411 (+)
G137898 NA non-coding upstream 108422 1879072 ~ 1879392 (+)
G137889 NA non-coding upstream 178202 1808205 ~ 1809612 (+)
G137890 NA non-coding upstream 181634 1804927 ~ 1806180 (+)
G137930 NA non-coding downstream 36727 2025193 ~ 2028808 (+)
G137943 LOC108430760 non-coding downstream 218901 2207367 ~ 2237690 (+)
G137951 arhgap21b,LOC108267702 non-coding downstream 256050 2244516 ~ 2245661 (+)
G137960 NA non-coding downstream 300626 2289092 ~ 2292464 (+)
G137965 LOC108430757 non-coding downstream 362168 2350634 ~ 2371378 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other upstream 136501 1835477 ~ 1851313 (+)
G137826 LOC108430781,LOC108267757 other upstream 487858 1491816 ~ 1499956 (+)
mrps14 mrps14 other upstream 947844 1037861 ~ 1039970 (+)
G137756 kiaa0040 other upstream 999176 980980 ~ 988638 (+)
rfwd2 rfwd2,LOC107658354 other upstream 1206618 762715 ~ 781196 (+)
G137929 NA other downstream 34289 2022755 ~ 2024386 (+)
LOC103045052 cfap57,LOC106594647 other downstream 912009 2900475 ~ 2936129 (+)
LOC103024858 NA other downstream 1093590 3082056 ~ 3084865 (+)
LOC103026108 selenot,selt1a,LOC107681817,LOC107708642 other downstream 1126954 3115420 ~ 3119488 (+)
LOC103047488 pls1,LOC108437523,LOC107722705,LOC107656864,LOC107565818,LOC107599860,LOC107709028,LOC107681752 other downstream 1813387 3801853 ~ 3839372 (+)

Expression


Co-expression Network