G137930


Basic Information

Item Value
gene id G137930
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 2025193 ~ 2028808 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU186621
ccaagtggttgctaggcagttgctaagtggttgctaggcagttgctaacgttttccaggtggttgctaagtggttgctaactggttgctaggcagttgctatcatttctaaagtggttgctaagtggttgctaggcagttgctaacgttttcctagtggttgctaagtggttgctaagtggttgctaggcagttgctaacgttttccagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186621 True 210 lncRNA 0.47 2 2025193 2028808

Neighbor

gene id symbol gene type direction distance location
LOC103042278 NA coding upstream 110174 1869474 ~ 1915019 (+)
kdsr kdsr,LOC106569188,LOC102792240 coding upstream 164678 1855297 ~ 1860515 (+)
LOC103043726 LOC103043726,LOC105899208 coding upstream 207981 1810725 ~ 1817212 (+)
tsc22d2 NA coding upstream 222874 1777225 ~ 1802319 (+)
LOC111194259 NA coding upstream 278955 1740171 ~ 1746238 (+)
dpp6 LOC108430761,LOC108267703 coding downstream 73413 2102221 ~ 2230065 (+)
LOC103042593 LOC108430758 coding downstream 293230 2322038 ~ 2362870 (+)
LOC103040438 pcyt1a,LOC103040438,LOC108430756,LOC108267677,LOC107709348,LOC107671662,LOC107727528 coding downstream 367149 2395957 ~ 2405369 (+)
LOC103040954 anxa13,anxa13l,LOC103040954,LOC107727547,LOC108267681,LOC107559374 coding downstream 394100 2422908 ~ 2431028 (+)
LOC103041271 LOC108430753 coding downstream 436523 2465331 ~ 2473513 (+)
G137917 LOC108430762,LOC108267465 non-coding upstream 36727 1987814 ~ 1988466 (+)
G137902 NA non-coding upstream 100338 1921553 ~ 1924855 (+)
G137831 NA non-coding upstream 106782 1916147 ~ 1918411 (+)
G137898 NA non-coding upstream 145801 1879072 ~ 1879392 (+)
G137889 NA non-coding upstream 215581 1808205 ~ 1809612 (+)
G137943 LOC108430760 non-coding downstream 178559 2207367 ~ 2237690 (+)
G137951 arhgap21b,LOC108267702 non-coding downstream 215708 2244516 ~ 2245661 (+)
G137960 NA non-coding downstream 260284 2289092 ~ 2292464 (+)
G137965 LOC108430757 non-coding downstream 321826 2350634 ~ 2371378 (+)
G137972 NA non-coding downstream 357702 2386510 ~ 2480525 (+)
G137929 NA other upstream 807 2022755 ~ 2024386 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other upstream 173880 1835477 ~ 1851313 (+)
G137826 LOC108430781,LOC108267757 other upstream 525237 1491816 ~ 1499956 (+)
mrps14 mrps14 other upstream 985223 1037861 ~ 1039970 (+)
G137756 kiaa0040 other upstream 1036555 980980 ~ 988638 (+)
LOC103045052 cfap57,LOC106594647 other downstream 871667 2900475 ~ 2936129 (+)
LOC103024858 NA other downstream 1053248 3082056 ~ 3084865 (+)
LOC103026108 selenot,selt1a,LOC107681817,LOC107708642 other downstream 1086612 3115420 ~ 3119488 (+)
LOC103047488 pls1,LOC108437523,LOC107722705,LOC107656864,LOC107565818,LOC107599860,LOC107709028,LOC107681752 other downstream 1773045 3801853 ~ 3839372 (+)
G138701 NA other downstream 1804447 3833255 ~ 3834460 (+)

Expression


Co-expression Network