G138045


Basic Information

Item Value
gene id G138045
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 2709396 ~ 2740767 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU186775
cagttttttttcatgcatcttggcatcatgttctcctcctccaccagtcttacacactgcttttgggtaactttatgctgctttactcctggtgcaaatattcaagcggttcagcttggttccagatataaaaaaaaaagatgagtttctttgattttaccaaattgaaaacctctggaatataatcaagaggaagatggatgatcacaaaccatcaaaccaccaaactgaactgcttgaatttttgcaccaggagtaaagcagcataaagttatccaaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186775 True 282 lncRNA 0.38 2 2709396 2740767

Neighbor

gene id symbol gene type direction distance location
LOC103044323 LOC108430700 coding upstream 115705 2589517 ~ 2593691 (+)
LOC111194265 NA coding upstream 145349 2562135 ~ 2564047 (+)
cmpk1 cmpk1,cmpk,LOC107719256,LOC107681787,LOC107671754,LOC107709354,LOC107559368 coding upstream 179233 2522508 ~ 2530163 (+)
LOC103042800 NA coding upstream 202269 2493964 ~ 2507127 (+)
tsen15 tsen15,LOC107681748 coding upstream 233216 2474061 ~ 2476180 (+)
LOC103044744 NA coding downstream 7051 2747818 ~ 2763344 (+)
LOC111194192 NA coding downstream 179952 2920719 ~ 2922118 (+)
slc1a7 slc1a7,slc1a7a,LOC107722044,LOC107671767,LOC107681716,LOC107593788 coding downstream 202369 2943136 ~ 2978445 (+)
aldh9a1 aldh9a1,LOC108430735,LOC108267615,LOC107681718,LOC107593789,LOC105891333 coding downstream 276813 3017580 ~ 3025513 (+)
LOC103024543 fzr1b,LOC108430732,LOC108268046,LOC107719268,LOC107701330,LOC107722096 coding downstream 297652 3038419 ~ 3049776 (+)
G138026 NA non-coding upstream 100354 2607980 ~ 2609042 (+)
G138015 NA non-coding upstream 130516 2568039 ~ 2578880 (+)
G137999 imp3,LOC107709332,LOC107671714 non-coding upstream 218269 2489424 ~ 2491127 (+)
G137982 ap2m1,LOC108430755 non-coding upstream 289365 2415925 ~ 2420031 (+)
G137978 NA non-coding upstream 300858 2407256 ~ 2408538 (+)
G138058 lrp8 non-coding downstream 24553 2765320 ~ 2768924 (+)
G138073 NA non-coding downstream 106790 2847557 ~ 2849112 (+)
G138074 NA non-coding downstream 122195 2862962 ~ 2863288 (+)
G138078 NA non-coding downstream 151876 2892643 ~ 2895410 (+)
G138080 NA non-coding downstream 156763 2897530 ~ 2899531 (+)
G137929 NA other upstream 685010 2022755 ~ 2024386 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other upstream 858083 1835477 ~ 1851313 (+)
G137826 LOC108430781,LOC108267757 other upstream 1209440 1491816 ~ 1499956 (+)
mrps14 mrps14 other upstream 1669426 1037861 ~ 1039970 (+)
G137756 kiaa0040 other upstream 1720758 980980 ~ 988638 (+)
LOC103045052 cfap57,LOC106594647 other downstream 159708 2900475 ~ 2936129 (+)
LOC103024858 NA other downstream 341289 3082056 ~ 3084865 (+)
LOC103026108 selenot,selt1a,LOC107681817,LOC107708642 other downstream 374653 3115420 ~ 3119488 (+)
LOC103047488 pls1,LOC108437523,LOC107722705,LOC107656864,LOC107565818,LOC107599860,LOC107709028,LOC107681752 other downstream 1061086 3801853 ~ 3839372 (+)
G138701 NA other downstream 1092488 3833255 ~ 3834460 (+)

Expression


Co-expression Network