G138092


Basic Information

Item Value
gene id G138092
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 2996554 ~ 2997077 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU186838
TTTGGTCAAGGAAAAATGGTTTATTGTCTTTTTATCCAGCATCTCCAAAACTGCTGTCCGTCCTTCCTTCACAGAGTAACAGCTCTTCATCCTGCTGTTCAATGTAGCCATTCATAACtgaccaaaaataataatttcaattaTTTACAACTGGTCTTGTTTCATGGTTTCTCAGGTGGAGCTCAAGCCTTTAAATCTGCGCTGCTTCAGGAGGTTCTTCAGCACTTGATGAACTGATGTGTGACTTCATAGATACCCACAGACTCACTGGCCTTCTCATCGTAGTCTGTCCAATCTTCTCCTGAAGGTTAATTTCAGGAAACTGGGTAGTGGTCTCGGCCCCTTTGGCTGCAAAGCCAGCCTGTGAGTAAGAAGGGAAAGGAATGGATTATATAAAAAACcaaagaccatttaaaaataaataacactttaTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186838 True 434 lncRNA 0.40 2 2996554 2997077

Neighbor

gene id symbol gene type direction distance location
slc1a7 slc1a7,slc1a7a,LOC107722044,LOC107671767,LOC107681716,LOC107593788 coding upstream 18109 2943136 ~ 2978445 (+)
LOC111194192 NA coding upstream 74436 2920719 ~ 2922118 (+)
LOC103044744 NA coding upstream 233210 2747818 ~ 2763344 (+)
LOC103044144 LOC108430743 coding upstream 284838 2689286 ~ 2711716 (+)
LOC103044323 LOC108430700 coding upstream 402863 2589517 ~ 2593691 (+)
aldh9a1 aldh9a1,LOC108430735,LOC108267615,LOC107681718,LOC107593789,LOC105891333 coding downstream 20503 3017580 ~ 3025513 (+)
LOC103024543 fzr1b,LOC108430732,LOC108268046,LOC107719268,LOC107701330,LOC107722096 coding downstream 41342 3038419 ~ 3049776 (+)
LOC103024237 NA coding downstream 66850 3063927 ~ 3069951 (+)
LOC103045957 LOC103045957,LOC108430690 coding downstream 108369 3105446 ~ 3108504 (+)
LOC103026425 zgc:153615,LOC103026425,LOC108430722,LOC107691014,LOC107747506,LOC107599852,LOC107708656,LOC107681829 coding downstream 130668 3127745 ~ 3142947 (+)
G138080 NA non-coding upstream 97023 2897530 ~ 2899531 (+)
G138078 NA non-coding upstream 101144 2892643 ~ 2895410 (+)
G138074 NA non-coding upstream 133266 2862962 ~ 2863288 (+)
G138073 NA non-coding upstream 147442 2847557 ~ 2849112 (+)
G138058 lrp8 non-coding upstream 227630 2765320 ~ 2768924 (+)
G138123 NA non-coding downstream 113325 3110402 ~ 3114615 (+)
G138524 gipc2,LOC108430720 non-coding downstream 159679 3156756 ~ 3175364 (+)
G138534 NA non-coding downstream 259824 3256901 ~ 3296382 (+)
G138598 NA non-coding downstream 495619 3492696 ~ 3494363 (+)
G138593 NA non-coding downstream 507499 3504576 ~ 3506945 (+)
LOC103045052 cfap57,LOC106594647 other upstream 60425 2900475 ~ 2936129 (+)
G137929 NA other upstream 972168 2022755 ~ 2024386 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other upstream 1145241 1835477 ~ 1851313 (+)
G137826 LOC108430781,LOC108267757 other upstream 1496598 1491816 ~ 1499956 (+)
mrps14 mrps14 other upstream 1956584 1037861 ~ 1039970 (+)
LOC103024858 NA other downstream 84979 3082056 ~ 3084865 (+)
LOC103026108 selenot,selt1a,LOC107681817,LOC107708642 other downstream 118343 3115420 ~ 3119488 (+)
LOC103047488 pls1,LOC108437523,LOC107722705,LOC107656864,LOC107565818,LOC107599860,LOC107709028,LOC107681752 other downstream 804776 3801853 ~ 3839372 (+)
G138701 NA other downstream 836178 3833255 ~ 3834460 (+)
LOC111194271 NA other downstream 1098920 4095997 ~ 4102241 (+)

Expression


Co-expression Network