G138922


Basic Information

Item Value
gene id G138922
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 4512596 ~ 4512806 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU188063
cagagggaagctgtaagatatgaagttctgtaagattttgtgggaaaacaaaactgcactgactttagacttgataataaaacacagtggatcaacaccagcagatgacagacatgtctctccaaaccatcactgattggtggaaacttcacactagacctcaagcagtttggactgtgtctctccactcttcctccagactctgctccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188063 True 211 lncRNA 0.44 1 4512596 4512806

Neighbor

gene id symbol gene type direction distance location
LOC103035953 dbt,LOC108411488,LOC107681723,LOC107715513,LOC108267843 coding upstream 118952 4385618 ~ 4393644 (+)
extl2 extl2 coding upstream 168267 4339083 ~ 4344329 (+)
LOC103035115 rc3h1,LOC108437509,LOC108267889,LOC107681708 coding upstream 186197 4307648 ~ 4326399 (+)
LOC103022774 NA coding upstream 358077 4142096 ~ 4154519 (+)
ccdc39 NA coding upstream 417154 4081012 ~ 4095442 (+)
LOC103026534 LOC108428888,LOC108268317 coding downstream 132195 4645001 ~ 4658142 (+)
LOC103038785 NA coding downstream 201309 4714115 ~ 4719644 (+)
blvra blvra coding downstream 215661 4728467 ~ 4733915 (+)
LOC103039605 NA coding downstream 245036 4757842 ~ 4761690 (+)
LOC103040234 keap1a,LOC108428896,LOC107749088,LOC107678690,LOC107721712,LOC108268010,LOC107690048 coding downstream 311824 4824630 ~ 4854002 (+)
G138859 NA non-coding upstream 113991 4397227 ~ 4398605 (+)
G138858 NA non-coding upstream 115645 4396080 ~ 4396951 (+)
G138869 NA non-coding upstream 149861 4362079 ~ 4362735 (+)
G138868 NA non-coding upstream 153176 4359162 ~ 4359420 (+)
G138867 NA non-coding upstream 154425 4357897 ~ 4358171 (+)
G138925 NA non-coding downstream 13764 4526570 ~ 4526771 (+)
G138941 NA non-coding downstream 144254 4657060 ~ 4657384 (+)
G138944 NA non-coding downstream 222830 4735636 ~ 4737366 (+)
G138945 NA non-coding downstream 225085 4737891 ~ 4738436 (+)
G138969 NA non-coding downstream 277694 4790500 ~ 4790958 (+)
G138839 NA other upstream 266732 4237609 ~ 4245864 (+)
LOC103023077 NA other upstream 340586 4165943 ~ 4172010 (+)
LOC111194271 NA other upstream 410355 4095997 ~ 4102241 (+)
LOC103047488 pls1,LOC108437523,LOC107722705,LOC107656864,LOC107565818,LOC107599860,LOC107709028,LOC107681752 other upstream 673224 3801853 ~ 3839372 (+)
LOC103026815 LOC108428843 other downstream 160574 4673380 ~ 4722774 (+)
LOC103039271 LOC108428890,LOC108268340 other downstream 190540 4703346 ~ 4708663 (+)
LOC103041273 zgc:110158,LOC108428898,LOC108267812,LOC107678694,LOC105906991,LOC107690032,LOC107721784,LOC102197062 other downstream 377067 4889873 ~ 5007006 (+)
G139154 NA other downstream 942674 5455480 ~ 5456004 (+)
LOC107197321 NA other downstream 1546611 6059417 ~ 6060050 (+)

Expression


Co-expression Network