G139154


Basic Information

Item Value
gene id G139154
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 5455480 ~ 5456004 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU188367
CACAAGAAAATGACAAAGCTCATTTAATGACTTACAAGTTGCATTGTATAAGCACAAACTAGTTTTAAATGCCATGAAAACTAAGTTTATGTTGTTTTCCAGATCTCTACATACTGATTTTAGCACTGTAAATATTACAACCCTGGAAGGATCCAGCATTGAGAGAGTCACAGAATATAAATACCTTGGCATATGGCTGGATGATAAACTCAGTTTTAAACCACACATAAGTAAACTAATCAGTAAATGCAGACAGAAGCTTGGTGATTTTTATAGACACAAGTCCTGTTTCCCCATGCACGCCAGAAAAAGAATAGTTGAGGCAACTTTACTGTCAGTGCTGGACTATGGCGACATTATTTATAAACTTGCTCCCTCCAGCTCCCTCAAATTATTGGACCCAGTGTATCACTCTGCACTGAGGTTCATCACTGGAGATCCATACAGAACTCATCACTGTGAGCTGTATGCAAAAGTTGGTTGGCCATCTTTAACGGTACGAAGGGAAACACActggttgatttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188367 True 525 TUCP 0.39 1 5455480 5456004

Neighbor

gene id symbol gene type direction distance location
klf17 LOC103372686,LOC107599908,LOC107657420,LOC107739832 coding upstream 20436 5432274 ~ 5435044 (+)
rnf220 rnf220,rnf220a coding upstream 179005 5129802 ~ 5276475 (+)
LOC103028041 otomp,LOC108428860,LOC107678687,LOC108267868,LOC107602611,LOC107690301 coding upstream 397784 5048152 ~ 5057696 (+)
d2hgdh d2hgdh,LOC107749221,LOC107678686 coding upstream 429192 5017934 ~ 5026288 (+)
znf622 znf622,LOC107721690 coding upstream 438549 5008136 ~ 5016931 (+)
slc6a9 slc6a9,LOC107700995,LOC107730788,LOC107739827,LOC107557089 coding downstream 4480 5460484 ~ 5562793 (+)
LOC103034049 LOC108430294,LOC103359748,LOC104917724,LOC100692768 coding downstream 143749 5599753 ~ 5612130 (+)
atp6v0b atp6v0b,LOC102788333 coding downstream 461562 5917566 ~ 5927862 (+)
LOC111194288 NA coding downstream 488119 5944123 ~ 5945693 (+)
LOC111194287 NA coding downstream 496962 5952966 ~ 5953691 (+)
G139139 NA non-coding upstream 12515 5442556 ~ 5442965 (+)
LOC111194278 NA non-coding upstream 45366 5407208 ~ 5410114 (+)
G139117 NA non-coding upstream 102755 5352155 ~ 5352725 (+)
G139115 NA non-coding upstream 103801 5351443 ~ 5351679 (+)
G139097 NA non-coding upstream 136650 5318567 ~ 5318830 (+)
G139170 NA non-coding downstream 158290 5614294 ~ 5615889 (+)
G139219 NA non-coding downstream 529412 5985416 ~ 5986073 (+)
LOC111194227 NA non-coding downstream 652659 6108663 ~ 6109216 (+)
G139259 NA non-coding downstream 654566 6110570 ~ 6110988 (+)
LOC111194228 NA non-coding downstream 670260 6126264 ~ 6129711 (+)
LOC103041273 zgc:110158,LOC108428898,LOC108267812,LOC107678694,LOC105906991,LOC107690032,LOC107721784,LOC102197062 other upstream 448474 4889873 ~ 5007006 (+)
LOC103026815 LOC108428843 other upstream 732706 4673380 ~ 4722774 (+)
LOC103039271 LOC108428890,LOC108268340 other upstream 746817 4703346 ~ 4708663 (+)
G138839 NA other upstream 1209616 4237609 ~ 4245864 (+)
LOC103023077 NA other upstream 1283470 4165943 ~ 4172010 (+)
LOC107197321 NA other downstream 603413 6059417 ~ 6060050 (+)
LOC103021569 NA other downstream 689959 6145963 ~ 6155929 (+)
G139268 NA other downstream 703716 6159720 ~ 6164164 (+)
LOC103028159 NA other downstream 779430 6235434 ~ 6242571 (+)
G139282 NA other downstream 810812 6266816 ~ 6267387 (+)

Expression


Co-expression Network