Gene
RNA
| Item | Value |
|---|---|
| gene id | G139268 |
| gene name | NA |
| gene type | misc |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 6159720 ~ 6164164 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| id | name | namespace |
|---|---|---|
| GO:0008519 | ammonium transmembrane transporter activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU188562 | False | 225 | lncRNA | 0.45 | 3 | 6159720 | 6164164 |
| TU188563 | True | 353 | TUCP | 0.44 | 2 | 6159720 | 6160166 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103047152 | NA | coding | upstream | 141585 | 6016214 ~ 6018135 (+) |
| LOC111194284 | NA | coding | upstream | 147415 | 6011579 ~ 6012305 (+) |
| LOC103047673 | NA | coding | upstream | 155808 | 6001986 ~ 6003912 (+) |
| LOC111194285 | NA | coding | upstream | 193616 | 5964234 ~ 5966104 (+) |
| LOC111194287 | NA | coding | upstream | 206029 | 5952966 ~ 5953691 (+) |
| LOC103030609 | NA | coding | downstream | 27293 | 6191457 ~ 6224897 (+) |
| LOC111194230 | NA | coding | downstream | 63376 | 6227540 ~ 6232060 (+) |
| LOC111194283 | NA | coding | downstream | 63378 | 6227542 ~ 6246723 (+) |
| LOC103029132 | NA | coding | downstream | 85361 | 6249525 ~ 6253963 (+) |
| nmnat2 | nmnat2,LOC106569066 | coding | downstream | 313268 | 6477432 ~ 6504960 (+) |
| LOC111194289 | NA | non-coding | upstream | 15819 | 6143375 ~ 6143901 (+) |
| LOC111194229 | NA | non-coding | upstream | 18122 | 6141005 ~ 6141598 (+) |
| LOC103047845 | NA | non-coding | upstream | 19356 | 6139647 ~ 6140364 (+) |
| LOC111194290 | NA | non-coding | upstream | 23147 | 6135958 ~ 6136573 (+) |
| LOC111194228 | NA | non-coding | upstream | 30009 | 6126264 ~ 6129711 (+) |
| G139224 | NA | non-coding | downstream | 27201 | 6191365 ~ 6273750 (+) |
| G139230 | NA | non-coding | downstream | 38648 | 6202812 ~ 6204652 (+) |
| G139301 | NA | non-coding | downstream | 242295 | 6406459 ~ 6408590 (+) |
| G139298 | NA | non-coding | downstream | 273454 | 6437618 ~ 6443166 (+) |
| G139326 | NA | non-coding | downstream | 373885 | 6538049 ~ 6549440 (+) |
| LOC103021569 | NA | other | upstream | 3791 | 6145963 ~ 6155929 (+) |
| LOC107197321 | NA | other | upstream | 99670 | 6059417 ~ 6060050 (+) |
| G139154 | NA | other | upstream | 703716 | 5455480 ~ 5456004 (+) |
| LOC103041273 | zgc:110158,LOC108428898,LOC108267812,LOC107678694,LOC105906991,LOC107690032,LOC107721784,LOC102197062 | other | upstream | 1152714 | 4889873 ~ 5007006 (+) |
| LOC103026815 | LOC108428843 | other | upstream | 1436946 | 4673380 ~ 4722774 (+) |
| LOC103028159 | NA | other | downstream | 71270 | 6235434 ~ 6242571 (+) |
| G139282 | NA | other | downstream | 102652 | 6266816 ~ 6267387 (+) |
| dhx9 | dhx9 | other | downstream | 554074 | 6718238 ~ 6742069 (+) |
| LOC103044361 | nedd8,LOC103358415,LOC107588156,LOC107562413,LOC104953875,LOC108438931,LOC106608856,LOC106577802 | other | downstream | 877396 | 7041560 ~ 7046298 (+) |
| LOC103030954 | NA | other | downstream | 2997169 | 9161333 ~ 9162523 (+) |
