G139328


Basic Information

Item Value
gene id G139328
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 6559387 ~ 6607657 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU188635
ttgtaaagagtgaaccagtagtccttgtagaactgttagaactaaaggtcggaaagcaggtcgcagttctcgcctcggaaaacttacagagtctggtttgagctcagaggagctccggcacagacacgagagcaccgctattcctcctattacacctcaatgcagcgctgcagtgagtttcaagctgtaatttcacttctttaaaaagat

Function

GO:

id name namespace
GO:1902911 protein kinase complex cellular_component
GO:0016533 protein kinase 5 complex cellular_component
GO:1902554 serine/threonine protein kinase complex cellular_component

KEGG:

id description
ko05030 Cocaine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU188635 True 210 lncRNA 0.46 2 6559387 6607657

Neighbor

gene id symbol gene type direction distance location
nmnat2 nmnat2,LOC106569066 coding upstream 54427 6477432 ~ 6504960 (+)
LOC103029132 NA coding upstream 305424 6249525 ~ 6253963 (+)
LOC111194283 NA coding upstream 312664 6227542 ~ 6246723 (+)
LOC111194230 NA coding upstream 327327 6227540 ~ 6232060 (+)
LOC103030609 NA coding upstream 334490 6191457 ~ 6224897 (+)
LOC103024078 LOC108438945 coding downstream 137285 6744942 ~ 6754413 (+)
LOC103039234 NA coding downstream 149766 6757423 ~ 6763871 (+)
LOC103040698 NA coding downstream 235245 6842902 ~ 6852263 (+)
LOC103041213 LOC103041213,LOC108438939,LOC107591383,LOC107704286,LOC107668983,LOC107557973,LOC107738136,LOC107706348 coding downstream 257150 6864807 ~ 6891899 (+)
c16h14orf119 NA coding downstream 338021 6945678 ~ 6950144 (+)
G139326 NA non-coding upstream 9947 6538049 ~ 6549440 (+)
G139298 NA non-coding upstream 116221 6437618 ~ 6443166 (+)
G139301 NA non-coding upstream 150797 6406459 ~ 6408590 (+)
G139224 NA non-coding upstream 285637 6191365 ~ 6273750 (+)
G139230 NA non-coding upstream 354735 6202812 ~ 6204652 (+)
G139347 NA non-coding downstream 160366 6768023 ~ 6768244 (+)
G139362 cbln12,LOC103040079,LOC108438942,LOC107738140,LOC107591379,LOC107668986,LOC107557939,LOC107704284 non-coding downstream 214258 6821915 ~ 6822686 (+)
G139371 NA non-coding downstream 246287 6853944 ~ 6909661 (+)
G139375 NA non-coding downstream 323861 6931518 ~ 6933473 (+)
LOC111194296 NA non-coding downstream 421625 7029282 ~ 7039380 (+)
G139282 NA other upstream 292000 6266816 ~ 6267387 (+)
LOC103028159 NA other upstream 316816 6235434 ~ 6242571 (+)
G139268 NA other upstream 395223 6159720 ~ 6164164 (+)
LOC103021569 NA other upstream 403458 6145963 ~ 6155929 (+)
LOC107197321 NA other upstream 499337 6059417 ~ 6060050 (+)
dhx9 dhx9 other downstream 110581 6718238 ~ 6742069 (+)
LOC103044361 nedd8,LOC103358415,LOC107588156,LOC107562413,LOC104953875,LOC108438931,LOC106608856,LOC106577802 other downstream 433903 7041560 ~ 7046298 (+)
LOC103030954 NA other downstream 2553676 9161333 ~ 9162523 (+)
LOC103030224 NA other downstream 2612617 9220274 ~ 9223981 (+)
G140062 NA other downstream 2932118 9539775 ~ 9540810 (+)

Expression


Co-expression Network