G140062



Basic Information


Item Value
gene id G140062
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 9539775 ~ 9540810 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU189594
tacaggtgctggtcaacgaattagaataatttgaaatagtgcaatcatgaaattctttgaatgcattttttgtgcagaaagcaaatcaggtgttcactgcacctgtcctactcgttagactaatcacagaactcgttacctggaaaaaaaattgctcagctgagctttccaaaaggcccatttaggccatttaactgtagaataaatgctcgaatttttgttttctgtgaagagtgttcactgtgcagtataaagtcagggttgagtagaatttctaagttgtaaaatcaatcatgggtaagcagcgcgacctctcaaccggaatagtggctcaaattcaagcccttcgccaacaaggcttgacccaaactaaaattgctgagcagctcggcatcagccagtcttccgtctgcaaagctctcaagaaaaactgcagcaagcgcaccaactgttccggcgtccgaaaaacttctgctcgcgacaacaagcagctgagaaagatcgcagtcagcaaccggttcaagtccacttccgagctcaccgacttgtggaacaagcagaccggcgctgacgtctccagatcaaccacttaccgtcgtctgcgtgaactcggcttcaaatctcgcgttccagcagtaaaaccgatgctgaacaagaaacaaatggagaaacggctgaagtgggccaaagaacacggcgagtggactgctgaagactggcagaaagtggtcttcagtgacgaatcacgcttctgcatctccttcggtgaccaaggtcctcgtgtctggcacCGTGGTGGCAAAACCTACAGCcgcgagtgcgtgaaaagatccgtcaagtttccccagagcgttatggtctggggatgcatgtccgctcgaggtgtagggaaactctgcttcctcaagaagactgtcaatgctgccgtatatcaagatgttctggaaacgttcctgattccgactgttgaggaacagttcggcg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU189594 True 984 TUCP 0.48 2 9539775 9540810

Neighbor


gene id symbol gene type direction distance location
LOC103039571 tmub1,LOC102788489 coding upstream 92642 9440692 ~ 9447133 (+)
LOC111194194 NA coding upstream 413955 9119168 ~ 9125820 (+)
LOC103021839 NA coding upstream 514761 9023097 ~ 9025014 (+)
LOC111194298 NA coding upstream 965864 8571833 ~ 8573911 (+)
clstn2 clstn2,LOC107738117,LOC107668970,LOC107706338,LOC107694660 coding upstream 1030452 8132286 ~ 8509323 (+)
klhl18 klhl18,LOC107733883,LOC107657445,LOC107730797,LOC107701005 coding downstream 172753 9713563 ~ 9740992 (+)
LOC103039200 zgc:136930,LOC108430265,LOC108267402,LOC107599883,LOC107657418,LOC107733879,LOC107730800 coding downstream 241919 9782729 ~ 9794211 (+)
LOC103038676 NA coding downstream 269772 9810582 ~ 9812214 (+)
fam217a NA coding downstream 289092 9829902 ~ 9847321 (+)
LOC103040953 si:dkey-154p10.3,LOC108430290,LOC107736657,LOC108267397,LOC107730804,LOC107701000 coding downstream 321202 9862012 ~ 9876520 (+)
G140060 NA non-coding upstream 467 9538378 ~ 9539308 (+)
G140042 NA non-coding upstream 37528 9473816 ~ 9502247 (+)
G140050 NA non-coding upstream 50663 9485374 ~ 9489112 (+)
LOC111194300 NA non-coding upstream 87209 9447134 ~ 9452566 (+)
G140012 NA non-coding upstream 99562 9439433 ~ 9440213 (+)
G140072 NA non-coding downstream 49537 9590347 ~ 9591803 (+)
G140074 nrbp2,LOC108267406,LOC108413492,LOC106597174 non-coding downstream 56663 9597473 ~ 9609161 (+)
G140169 NA non-coding downstream 207886 9748696 ~ 9749098 (+)
G140245 NA non-coding downstream 368821 9909631 ~ 9910544 (+)
G140249 NA non-coding downstream 384323 9925133 ~ 9926043 (+)
LOC103030224 NA other upstream 315794 9220274 ~ 9223981 (+)
LOC103030954 NA other upstream 377252 9161333 ~ 9162523 (+)
LOC103044361 nedd8,LOC103358415,LOC107588156,LOC107562413,LOC104953875,LOC108438931,LOC106608856,LOC106577802 other upstream 2493477 7041560 ~ 7046298 (+)
dhx9 dhx9 other upstream 2797706 6718238 ~ 6742069 (+)
G139282 NA other upstream 3272388 6266816 ~ 6267387 (+)
G140103 NA other downstream 202888 9743698 ~ 9745355 (+)
G140258 NA other downstream 449108 9989918 ~ 9990296 (+)
G140262 NA other downstream 452776 9993586 ~ 9994066 (+)
G140336 prkci,LOC107659412,LOC107706387,LOC102783124 other downstream 770290 10311100 ~ 10345471 (+)
G140402 NA other downstream 854710 10395520 ~ 10399976 (+)

Expression



Co-expression Network