G140072


Basic Information

Item Value
gene id G140072
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 9590347 ~ 9591803 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU189609
AGAGCaaagagaaacacacagagcaAAGAGGAACACAGAGCAAAGAGGAACACACAGAGCAAAGAGGAACACACAGAGCAAAGAGGAACACAGAGCACAGCAAGAAACACAGAGcaaagagGAACACAGAGCAAAGAGGAACACAGAGCAAAGAGGAACACACAGAGCaaagagaaacacacagagcaAAGAGGAACAACAGAGCAAAGAGGAACACAGAGAGCAAAGAGGAACACAGAGCaaagagaaacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189609 True 255 lncRNA 0.46 3 9590347 9591803

Neighbor

gene id symbol gene type direction distance location
LOC103039571 tmub1,LOC102788489 coding upstream 143214 9440692 ~ 9447133 (+)
LOC111194194 NA coding upstream 464527 9119168 ~ 9125820 (+)
LOC103021839 NA coding upstream 565333 9023097 ~ 9025014 (+)
LOC111194298 NA coding upstream 1016436 8571833 ~ 8573911 (+)
clstn2 clstn2,LOC107738117,LOC107668970,LOC107706338,LOC107694660 coding upstream 1081024 8132286 ~ 8509323 (+)
klhl18 klhl18,LOC107733883,LOC107657445,LOC107730797,LOC107701005 coding downstream 121760 9713563 ~ 9740992 (+)
LOC103039200 zgc:136930,LOC108430265,LOC108267402,LOC107599883,LOC107657418,LOC107733879,LOC107730800 coding downstream 190926 9782729 ~ 9794211 (+)
LOC103038676 NA coding downstream 218779 9810582 ~ 9812214 (+)
fam217a NA coding downstream 238099 9829902 ~ 9847321 (+)
LOC103040953 si:dkey-154p10.3,LOC108430290,LOC107736657,LOC108267397,LOC107730804,LOC107701000 coding downstream 270209 9862012 ~ 9876520 (+)
G140057 LOC108413493,LOC108267407,LOC107599879 non-coding upstream 26723 9532829 ~ 9563624 (+)
G140060 NA non-coding upstream 51039 9538378 ~ 9539308 (+)
G140042 NA non-coding upstream 88100 9473816 ~ 9502247 (+)
G140050 NA non-coding upstream 101235 9485374 ~ 9489112 (+)
LOC111194300 NA non-coding upstream 137781 9447134 ~ 9452566 (+)
G140074 nrbp2,LOC108267406,LOC108413492,LOC106597174 non-coding downstream 5670 9597473 ~ 9609161 (+)
G140169 NA non-coding downstream 156893 9748696 ~ 9749098 (+)
G140245 NA non-coding downstream 317828 9909631 ~ 9910544 (+)
G140249 NA non-coding downstream 333330 9925133 ~ 9926043 (+)
G140251 NA non-coding downstream 334506 9926309 ~ 9926576 (+)
G140062 NA other upstream 49537 9539775 ~ 9540810 (+)
LOC103030224 NA other upstream 366366 9220274 ~ 9223981 (+)
LOC103030954 NA other upstream 427824 9161333 ~ 9162523 (+)
LOC103044361 nedd8,LOC103358415,LOC107588156,LOC107562413,LOC104953875,LOC108438931,LOC106608856,LOC106577802 other upstream 2544049 7041560 ~ 7046298 (+)
dhx9 dhx9 other upstream 2848278 6718238 ~ 6742069 (+)
G140103 NA other downstream 151895 9743698 ~ 9745355 (+)
G140258 NA other downstream 398115 9989918 ~ 9990296 (+)
G140262 NA other downstream 401783 9993586 ~ 9994066 (+)
G140336 prkci,LOC107659412,LOC107706387,LOC102783124 other downstream 719297 10311100 ~ 10345471 (+)
G140402 NA other downstream 803717 10395520 ~ 10399976 (+)

Expression


Co-expression Network