G140169


Basic Information

Item Value
gene id G140169
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 9748696 ~ 9749098 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU189748
aaatagaaataaaaagaaataaatatataatctaaatctaaatgagtgggagacactatatgtacaatacaacaaaaacacaatagacatttgtgagacagaagataatagtgcaatattaatggtgattaagatcaagtgacaatataaatagaacccgtataacagtagtgcaatgttgtatctagcttaaggctggtaaagttcttaaagttcccagttcttggggaattaaagtgtgtatgacagtgcagcgtaacagtagtgcaggtattgggtgtgtagtgcaggtccttttacaaaagttacagtactgtgtgtgttctagtgcagagtttcagtactgtgttggtgGGAGGATGTGGGGTCAGGatgatgagagtgtgtgtgctgtgggcaggat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189748 True 403 lncRNA 0.37 1 9748696 9749098

Neighbor

gene id symbol gene type direction distance location
klhl18 klhl18,LOC107733883,LOC107657445,LOC107730797,LOC107701005 coding upstream 7704 9713563 ~ 9740992 (+)
LOC103039571 tmub1,LOC102788489 coding upstream 301563 9440692 ~ 9447133 (+)
LOC111194194 NA coding upstream 622876 9119168 ~ 9125820 (+)
LOC103021839 NA coding upstream 723682 9023097 ~ 9025014 (+)
LOC111194298 NA coding upstream 1174785 8571833 ~ 8573911 (+)
LOC103039200 zgc:136930,LOC108430265,LOC108267402,LOC107599883,LOC107657418,LOC107733879,LOC107730800 coding downstream 33631 9782729 ~ 9794211 (+)
LOC103038676 NA coding downstream 61484 9810582 ~ 9812214 (+)
fam217a NA coding downstream 80804 9829902 ~ 9847321 (+)
LOC103040953 si:dkey-154p10.3,LOC108430290,LOC107736657,LOC108267397,LOC107730804,LOC107701000 coding downstream 112914 9862012 ~ 9876520 (+)
LOC103040652 NA coding downstream 131068 9880166 ~ 9884126 (+)
G140074 nrbp2,LOC108267406,LOC108413492,LOC106597174 non-coding upstream 139535 9597473 ~ 9609161 (+)
G140072 NA non-coding upstream 156893 9590347 ~ 9591803 (+)
G140057 LOC108413493,LOC108267407,LOC107599879 non-coding upstream 185072 9532829 ~ 9563624 (+)
G140060 NA non-coding upstream 209388 9538378 ~ 9539308 (+)
G140042 NA non-coding upstream 246449 9473816 ~ 9502247 (+)
G140245 NA non-coding downstream 160533 9909631 ~ 9910544 (+)
G140249 NA non-coding downstream 176035 9925133 ~ 9926043 (+)
G140251 NA non-coding downstream 177211 9926309 ~ 9926576 (+)
G140255 NA non-coding downstream 191930 9941028 ~ 9942279 (+)
G140274 NA non-coding downstream 349070 10098168 ~ 10156048 (+)
G140103 NA other upstream 3341 9743698 ~ 9745355 (+)
G140062 NA other upstream 207886 9539775 ~ 9540810 (+)
LOC103030224 NA other upstream 524715 9220274 ~ 9223981 (+)
LOC103030954 NA other upstream 586173 9161333 ~ 9162523 (+)
LOC103044361 nedd8,LOC103358415,LOC107588156,LOC107562413,LOC104953875,LOC108438931,LOC106608856,LOC106577802 other upstream 2702398 7041560 ~ 7046298 (+)
G140258 NA other downstream 240820 9989918 ~ 9990296 (+)
G140262 NA other downstream 244488 9993586 ~ 9994066 (+)
G140336 prkci,LOC107659412,LOC107706387,LOC102783124 other downstream 562002 10311100 ~ 10345471 (+)
G140402 NA other downstream 646422 10395520 ~ 10399976 (+)
sppl2b sppl2b,sppl2,LOC107738168,LOC107591351,LOC107668984 other downstream 678168 10427266 ~ 10444540 (+)

Expression


Co-expression Network