G41087


Basic Information

Item Value
gene id G41087
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 1298166 ~ 1385513 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU46649
AAAACAATGTAAAAACATATGTTGTCATAACTTATTGATCACATAATTTTTTACAGTGTATGGGAACGTCTTCAGCGTGAGCCGGTGTCTGAGTCACGTGTACACGCCAAGGATGAAGTCAGGTGACACGATGTTGTGTGTGATCAAGTCTATAAATAACACCTGCGCAAGAGCGTCACCAAATTTACTTGTCTAAAGAAGCCGCGCAGGCGTACTTGAAGTATGGAACTGCGACTTAAAAAAATGAAACTAAATGAAAAAAAAAAAAAAAAAAAAAAAAACTGAATTACAGGCAGTATCCCTCTCCTGGACATTCCAAAATCAAAACCTGACAAAAAAACGCTTCAGGCTGTATTGTGAGTTTGGCTGAATCTCCACAGAAATATTGTGCTGGTGGAATTCAGACAAAATAACCGTATGTTGATTCTGGATGCAATCTGGACTGAGAGTGGAAACCCCCAAATAAAATCAAGAGTATTAATAAAGGGTAGTTGATGAATAATAACATGTACATGAGTTTGTTTTATTCAACATCAAGATTTGAAGTTAGAAAATGTAATAAATAAATTAAATTAAATTAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46649 True 584 lncRNA 0.34 2 1298166 1385513

Neighbor

gene id symbol gene type direction distance location
CI01000006_01158519_01160763 NA coding upstream 137160 1157729 ~ 1161006 (+)
CI01000006_01149220_01154850 MAT2B coding upstream 142852 1149041 ~ 1155314 (+)
CI01000006_01139490_01142592 NA coding upstream 155341 1138955 ~ 1142825 (+)
CI01000006_01032572_01040625 CLK4B coding upstream 257024 1032572 ~ 1041142 (+)
CI01000006_01006114_01006327 NA coding upstream 291572 1006114 ~ 1006594 (+)
CI01000006_01525438_01530330 NA coding downstream 139925 1525438 ~ 1530375 (+)
CI01000006_01545476_01546708 CRCP coding downstream 159963 1545476 ~ 1546718 (+)
CI01000006_01551365_01552945 NA coding downstream 165852 1551365 ~ 1553658 (+)
CI01000006_01554462_01567732 TPST1L, TPST1 coding downstream 168949 1554462 ~ 1567772 (+)
CI01000006_01570716_01587422 NA coding downstream 185203 1570716 ~ 1587781 (+)
G41081 NA non-coding upstream 6661 1290577 ~ 1291505 (+)
G41056 NA non-coding upstream 44471 1250405 ~ 1253695 (+)
G41045 NA non-coding upstream 74302 1222090 ~ 1223864 (+)
G41028 NA non-coding upstream 112423 1184065 ~ 1185743 (+)
G40998 NA non-coding upstream 266974 1028708 ~ 1031192 (+)
G41128 NA non-coding downstream 35020 1420533 ~ 1499033 (+)
G41134 NA non-coding downstream 65730 1451243 ~ 1459662 (+)
G41165 NA non-coding downstream 114399 1499912 ~ 1500164 (+)
G41225 NA non-coding downstream 452629 1838142 ~ 1839882 (+)
CI01000006_01842317_01859671 NA non-coding downstream 474791 1842317 ~ 1861834 (+)
G40768 NA other upstream 805140 488407 ~ 493026 (+)
G40767 NA other upstream 814831 360009 ~ 484185 (+)
G40772 NA other upstream 818972 475465 ~ 479194 (+)
G41170 NA other downstream 306552 1692065 ~ 1695821 (+)
G41424 NA other downstream 1260149 2645662 ~ 2660570 (+)
G41591 NA other downstream 1450654 2836167 ~ 2839421 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 2343717 3734554 ~ 3736035 (+)
G41996 NA other downstream 3731693 5117206 ~ 5124149 (+)

Expression


Co-expression Network