Gene
RNA
| Item | Value |
|---|---|
| gene id | G140644 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 11452019 ~ 11455807 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU190439 | True | 276 | lncRNA | 0.43 | 2 | 11452019 | 11455807 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC111194236 | NA | coding | upstream | 1076 | 11450374 ~ 11450943 (+) |
| LOC103030487 | NA | coding | upstream | 13066 | 11438421 ~ 11438953 (+) |
| LOC103030163 | NA | coding | upstream | 16449 | 11433551 ~ 11435570 (+) |
| LOC111194235 | NA | coding | upstream | 22648 | 11428868 ~ 11429371 (+) |
| LOC111194306 | NA | coding | upstream | 25192 | 11417891 ~ 11426827 (+) |
| LOC103022687 | NA | coding | downstream | 25942 | 11481749 ~ 11493706 (+) |
| nol7 | NA | coding | downstream | 65633 | 11521440 ~ 11530907 (+) |
| retreg1 | fam134b | coding | downstream | 120305 | 11576112 ~ 11607386 (+) |
| LOC103030795 | NA | coding | downstream | 188229 | 11644036 ~ 11655408 (+) |
| LOC103026935 | ralyl | coding | downstream | 216801 | 11672608 ~ 11754085 (+) |
| G140670 | NA | non-coding | upstream | 7813 | 11443841 ~ 11444206 (+) |
| G140563 | NA | non-coding | upstream | 323110 | 11127288 ~ 11128909 (+) |
| G140556 | NA | non-coding | upstream | 447493 | 11003817 ~ 11004526 (+) |
| G140550 | NA | non-coding | upstream | 472929 | 10978574 ~ 10979090 (+) |
| G140543 | NA | non-coding | upstream | 502534 | 10949255 ~ 10949485 (+) |
| G140676 | epdr1,LOC108437243,LOC107664036,LOC107558964,LOC107713986,LOC108267170 | non-coding | downstream | 45249 | 11501056 ~ 11520012 (+) |
| G140637 | NA | non-coding | downstream | 50857 | 11506664 ~ 11513421 (+) |
| G140666 | NA | non-coding | downstream | 77012 | 11532819 ~ 11535275 (+) |
| G140688 | NA | non-coding | downstream | 114194 | 11570001 ~ 11570202 (+) |
| G140695 | NA | non-coding | downstream | 173609 | 11629416 ~ 11635600 (+) |
| G140659 | NA | other | upstream | 68514 | 11380098 ~ 11383505 (+) |
| G140520 | NA | other | upstream | 653128 | 10798545 ~ 10798891 (+) |
| sppl2b | sppl2b,sppl2,LOC107738168,LOC107591351,LOC107668984 | other | upstream | 1007479 | 10427266 ~ 10444540 (+) |
| G140402 | NA | other | upstream | 1052043 | 10395520 ~ 10399976 (+) |
| G140336 | prkci,LOC107659412,LOC107706387,LOC102783124 | other | upstream | 1106548 | 10311100 ~ 10345471 (+) |
| G140931 | NA | other | downstream | 782181 | 12237988 ~ 12240625 (+) |
| G140930 | NA | other | downstream | 923189 | 12378996 ~ 12381554 (+) |
| G141086 | NA | other | downstream | 1285666 | 12741473 ~ 12743453 (+) |
| LOC103029537 | adcyap1b,LOC103029537,LOC108437223,LOC107713980 | other | downstream | 1386991 | 12842798 ~ 12860327 (+) |
| G141361 | tcea1 | other | downstream | 2399796 | 13855603 ~ 13858605 (+) |
