Gene
RNA
| Item | Value |
|---|---|
| gene id | G140830 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 11875270 ~ 11890671 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU190694 | True | 255 | lncRNA | 0.44 | 2 | 11875270 | 11890671 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| e2f5 | LOC108437220,LOC108268108 | coding | upstream | 79426 | 11784077 ~ 11795844 (+) |
| lrrcc1 | lrrcc1 | coding | upstream | 93681 | 11755661 ~ 11781589 (+) |
| LOC103026935 | ralyl | coding | upstream | 121185 | 11672608 ~ 11754085 (+) |
| LOC103030795 | NA | coding | upstream | 219862 | 11644036 ~ 11655408 (+) |
| retreg1 | fam134b | coding | upstream | 267884 | 11576112 ~ 11607386 (+) |
| LOC103028579 | NA | coding | downstream | 241516 | 12132187 ~ 12172466 (+) |
| LOC103027534 | NA | coding | downstream | 289016 | 12179687 ~ 12464647 (+) |
| LOC103030385 | LOC108437225 | coding | downstream | 817439 | 12708110 ~ 12732368 (+) |
| LOC103030306 | NA | coding | downstream | 1502706 | 13393377 ~ 13437203 (+) |
| rgs20 | rgs20,LOC108440656 | coding | downstream | 1905723 | 13796394 ~ 13846951 (+) |
| G140796 | NA | non-coding | upstream | 33372 | 11837173 ~ 11841898 (+) |
| G140795 | NA | non-coding | upstream | 38438 | 11835486 ~ 11836832 (+) |
| G140791 | NA | non-coding | upstream | 56114 | 11816566 ~ 11819156 (+) |
| G140695 | NA | non-coding | upstream | 239670 | 11629416 ~ 11635600 (+) |
| G140688 | NA | non-coding | upstream | 305068 | 11570001 ~ 11570202 (+) |
| G140829 | NA | non-coding | downstream | 38970 | 11929641 ~ 11930833 (+) |
| G140843 | NA | non-coding | downstream | 80433 | 11971104 ~ 11972529 (+) |
| G140896 | NA | non-coding | downstream | 163245 | 12053916 ~ 12054155 (+) |
| G140938 | NA | non-coding | downstream | 350654 | 12241325 ~ 12241835 (+) |
| G140944 | NA | non-coding | downstream | 376497 | 12267168 ~ 12267634 (+) |
| LOC111194237 | NA | other | upstream | 396530 | 11455485 ~ 11478740 (+) |
| G140659 | NA | other | upstream | 491765 | 11380098 ~ 11383505 (+) |
| G140520 | NA | other | upstream | 1076379 | 10798545 ~ 10798891 (+) |
| sppl2b | sppl2b,sppl2,LOC107738168,LOC107591351,LOC107668984 | other | upstream | 1430730 | 10427266 ~ 10444540 (+) |
| G140402 | NA | other | upstream | 1475294 | 10395520 ~ 10399976 (+) |
| G140931 | NA | other | downstream | 347317 | 12237988 ~ 12240625 (+) |
| G140930 | NA | other | downstream | 488325 | 12378996 ~ 12381554 (+) |
| G141086 | NA | other | downstream | 850802 | 12741473 ~ 12743453 (+) |
| LOC103029537 | adcyap1b,LOC103029537,LOC108437223,LOC107713980 | other | downstream | 952127 | 12842798 ~ 12860327 (+) |
| G141361 | tcea1 | other | downstream | 1964932 | 13855603 ~ 13858605 (+) |
