G140955


Basic Information

Item Value
gene id G140955
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 12444730 ~ 12446783 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU190855
attgtccaacctgtCATTGTTCACCCTatcattgtccaccctgtaattgtccaccctgtcattattCACTGTCTTTGTCCAGCTTGTCCTTGTTCACCCTGTCATTGTTCACCCTGTCATTATTCACTGTCTTTGTCCAGCTtgtcattgtccaacctgtcattgtccatcctgtcattgtccaacctgtcattgtccaccctATCATTGTCCAGCCTa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190855 True 219 lncRNA 0.45 3 12444730 12446783

Neighbor

gene id symbol gene type direction distance location
LOC103028579 NA coding upstream 272264 12132187 ~ 12172466 (+)
LOC103028056 NA coding upstream 516982 11866450 ~ 11927748 (+)
e2f5 LOC108437220,LOC108268108 coding upstream 648886 11784077 ~ 11795844 (+)
lrrcc1 lrrcc1 coding upstream 663141 11755661 ~ 11781589 (+)
LOC103026935 ralyl coding upstream 690645 11672608 ~ 11754085 (+)
LOC103030385 LOC108437225 coding downstream 261327 12708110 ~ 12732368 (+)
LOC103030306 NA coding downstream 946594 13393377 ~ 13437203 (+)
rgs20 rgs20,LOC108440656 coding downstream 1349611 13796394 ~ 13846951 (+)
LOC103040707 NA coding downstream 1419504 13866287 ~ 13882845 (+)
gpr141 NA coding downstream 1454125 13900908 ~ 13918612 (+)
G140928 NA non-coding upstream 95462 12348585 ~ 12349268 (+)
G140944 NA non-coding upstream 177096 12267168 ~ 12267634 (+)
G140938 NA non-coding upstream 202895 12241325 ~ 12241835 (+)
G140896 NA non-coding upstream 390575 12053916 ~ 12054155 (+)
G140843 NA non-coding upstream 472201 11971104 ~ 11972529 (+)
G140957 NA non-coding downstream 21553 12468336 ~ 12469122 (+)
G141046 NA non-coding downstream 39497 12486280 ~ 12486571 (+)
G141074 NA non-coding downstream 161863 12608646 ~ 12609502 (+)
G141075 NA non-coding downstream 164515 12611298 ~ 12612090 (+)
G141087 NA non-coding downstream 291459 12738242 ~ 12785737 (+)
G140930 NA other upstream 63176 12378996 ~ 12381554 (+)
G140931 NA other upstream 204105 12237988 ~ 12240625 (+)
LOC111194237 NA other upstream 965990 11455485 ~ 11478740 (+)
G140659 NA other upstream 1061225 11380098 ~ 11383505 (+)
G140520 NA other upstream 1645839 10798545 ~ 10798891 (+)
G141086 NA other downstream 294690 12741473 ~ 12743453 (+)
LOC103029537 adcyap1b,LOC103029537,LOC108437223,LOC107713980 other downstream 396015 12842798 ~ 12860327 (+)
G141361 tcea1 other downstream 1408820 13855603 ~ 13858605 (+)
G141410 NA other downstream 1733882 14180665 ~ 14200998 (+)
G141495 NA other downstream 2081357 14528140 ~ 14530296 (+)

Expression


Co-expression Network