G141075


Basic Information

Item Value
gene id G141075
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 12611298 ~ 12612090 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU191007
TTTCCTTTACTTTTTAGTATACAGTTTTgcataactgaaaaaaaaacacaatagctaTAAACTAGCTATTGAGACAAAACGACTCAACTGAGAggaagctaacttagctagctaggaTTCTACCGCTAACAacaaagctagctagctAGCCGTCCAGCCAGAGTACTAACCCTGCGCTCCAGGGCTCCGTTAGCTTATTCATCCACCAACTTACCCACATCTTGATCAAAAGGATTGGACGTGAATAGAGGCATTGCCGGGAGGATGTAAAGGAAGGAGATCagcaggtagagagagagataagtcTGAACCCAGTCCTCTTCTGTTTCCCCTTTTACTGTCAGCACTTAAGTTACTTAatagctaaattaataaacataataaagttGCCGCAGAAGGACTGACTGatctaagttagcttagctaggttagctaactaactgaGCTAAACAGCGGAGAGCCCCCTCAGCAGCAGCTGCAACAACAGACACAGCATCAGGCTGGAGGGAGCAGGAGCAGCGctgtcaccacacacacacacacacagagatacacactaACTAACGCCAGATACTATAACGTAGCGTATGTAGTACACGCTGTTCGCCACATGGATAGCTTAGCTAGTTAACGGGTTAATTAGTTAAGTTAGTTAACCTAGATACACGACCCGATCGCAAACAACAACAGCTAACTTAACTGCAGGccctctgttttgttttcctaatagaaacagagagaaaaggcTGTAATGCAGACAAGGCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191007 True 767 lncRNA 0.44 2 12611298 12612090

Neighbor

gene id symbol gene type direction distance location
LOC103027534 NA coding upstream 146651 12179687 ~ 12464647 (+)
LOC103028579 NA coding upstream 438832 12132187 ~ 12172466 (+)
LOC103028056 NA coding upstream 683550 11866450 ~ 11927748 (+)
e2f5 LOC108437220,LOC108268108 coding upstream 815454 11784077 ~ 11795844 (+)
lrrcc1 lrrcc1 coding upstream 829709 11755661 ~ 11781589 (+)
LOC103030385 LOC108437225 coding downstream 96020 12708110 ~ 12732368 (+)
LOC103030306 NA coding downstream 781287 13393377 ~ 13437203 (+)
rgs20 rgs20,LOC108440656 coding downstream 1184304 13796394 ~ 13846951 (+)
LOC103040707 NA coding downstream 1254197 13866287 ~ 13882845 (+)
gpr141 NA coding downstream 1288818 13900908 ~ 13918612 (+)
G141074 NA non-coding upstream 1796 12608646 ~ 12609502 (+)
G141046 NA non-coding upstream 124727 12486280 ~ 12486571 (+)
G140957 NA non-coding upstream 142176 12468336 ~ 12469122 (+)
G140955 NA non-coding upstream 164515 12444730 ~ 12446783 (+)
G140928 NA non-coding upstream 262030 12348585 ~ 12349268 (+)
G141087 NA non-coding downstream 126152 12738242 ~ 12785737 (+)
G141099 NA non-coding downstream 202777 12814867 ~ 12816236 (+)
G141178 NA non-coding downstream 372777 12984867 ~ 12990434 (+)
G141185 NA non-coding downstream 418682 13030772 ~ 13033593 (+)
G141188 NA non-coding downstream 428700 13040790 ~ 13041271 (+)
G140930 NA other upstream 229744 12378996 ~ 12381554 (+)
G140931 NA other upstream 370673 12237988 ~ 12240625 (+)
LOC111194237 NA other upstream 1132558 11455485 ~ 11478740 (+)
G140659 NA other upstream 1227793 11380098 ~ 11383505 (+)
G140520 NA other upstream 1812407 10798545 ~ 10798891 (+)
G141086 NA other downstream 129383 12741473 ~ 12743453 (+)
LOC103029537 adcyap1b,LOC103029537,LOC108437223,LOC107713980 other downstream 230708 12842798 ~ 12860327 (+)
G141361 tcea1 other downstream 1243513 13855603 ~ 13858605 (+)
G141410 NA other downstream 1568575 14180665 ~ 14200998 (+)
G141495 NA other downstream 1916050 14528140 ~ 14530296 (+)

Expression


Co-expression Network