G141220


Basic Information

Item Value
gene id G141220
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 13315891 ~ 13316365 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU191184
aactcaagatggcggcgcgctCGGGTGCAGCGGCTCTTAGCTCTCCAATTTGGTGTTTGTTTTTGATAGTTTTTTCGtgtttatttttagaatttAGCAAAGCAAACCGTAGGTTGAGCCGACAGAACCTGATAGACATCGGTTTGAGGTACAATCTGGCGGTTAACAGCAATTTCCATCAGAAACACAACATTCCAGAGGACATAGCAAGACCGCCAGGATCTCCGTGGATCACCAGCCCGCCCGGCAAGAGCAAGAGGAGGCGgaggaacagaaaacaaaagcgTGGATGCCGGTCAGGCTCTGAGGCTAGGCTACGTAAACAACCCCACAGACCGGCATTACCGAGCCTCTTCCTCTCCAACGCCAGATCCATCACTCAGAAAATGGACGAGTTGGAGTTACAGATAGCGACAAACAGTTCTGTACGGAActgtagcatttttttaattacggAAACATGGCTACACCCGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191184 True 475 TUCP 0.49 1 13315891 13316365

Neighbor

gene id symbol gene type direction distance location
LOC103029125 yes1,LOC108437224,LOC107713975,LOC107584194,LOC107686048 coding downstream 492931 12740384 ~ 12822960 (-)
LOC103028809 colec12,LOC103028809,LOC108437226,LOC108267818,LOC107686068 coding downstream 612613 12618151 ~ 12703278 (-)
stam stam,LOC107664071 coding downstream 703784 12596820 ~ 12612107 (-)
LOC103028177 LOC108437218 coding downstream 726148 12583877 ~ 12589743 (-)
LOC103032996 NA coding downstream 1194615 12056835 ~ 12121276 (-)
LOC103030941 lpin2,lipin2,LOC108413408,LOC107686047,LOC107584234 coding upstream 131910 13448275 ~ 13509530 (-)
bag1 bag1,LOC107746903,LOC107664079 coding upstream 272151 13588516 ~ 13591700 (-)
LOC103031885 chmp5,LOC108440659,LOC107732555,LOC107664100,LOC107586329,LOC107558945,LOC107686086 coding upstream 277392 13593757 ~ 13599834 (-)
LOC103032206 oprk1,LOC108440658,LOC107664042,LOC107732559 coding upstream 310467 13626832 ~ 13635497 (-)
atp6v1h atp6v1h,LOC107664082,LOC107686042 coding upstream 372858 13689223 ~ 13794272 (-)
G141218 NA non-coding downstream 861 13314691 ~ 13315030 (-)
G141217 NA non-coding downstream 27518 13288126 ~ 13288373 (-)
G141180 NA non-coding downstream 308893 13006127 ~ 13006998 (-)
G141179 NA non-coding downstream 325436 12984867 ~ 12990455 (-)
G141171 NA non-coding downstream 379812 12935871 ~ 12936079 (-)
G141245 NA non-coding upstream 52256 13368621 ~ 13372297 (-)
G141247 NA non-coding upstream 123295 13439660 ~ 13480474 (-)
G141257 NA non-coding upstream 194174 13510539 ~ 13510781 (-)
G141258 NA non-coding upstream 194745 13511110 ~ 13511318 (-)
G141336 NA non-coding upstream 437545 13753910 ~ 13754761 (-)
LOC103027860 cacnb2b,LOC108437228,LOC107664070,LOC107713974,LOC107751551,LOC107585874 other downstream 743744 12472804 ~ 12572147 (-)
G141020 NA other downstream 900736 12348559 ~ 12415155 (-)
G140975 NA other downstream 1140897 12173695 ~ 12174994 (-)
G140772 fam134b other downstream 1705362 11606235 ~ 11610529 (-)
G140472 slc4a2,LOC108413474,LOC107718031 other downstream 2801084 10511089 ~ 10514807 (-)
G141255 LOC108413406 other upstream 120266 13436631 ~ 13438896 (-)
LOC103040388 LOC108440660,LOC107686045,LOC107746915,LOC108268132,LOC107732591 other upstream 195787 13512152 ~ 13585394 (-)
tcea1 tcea1 other upstream 539192 13855557 ~ 13864078 (-)
G141383 NA other upstream 592819 13909184 ~ 13910602 (-)
fam173b fam173b,LOC108440663,LOC106941709,LOC107578923,LOC107550697,LOC107746922,LOC107664046 other upstream 894080 14210445 ~ 14214316 (-)

Expression


Co-expression Network