G141221


Basic Information

Item Value
gene id G141221
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 13333927 ~ 13334392 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU191185
atattatattataatgccaactttgtctgtggcttgtagtataactgggcatattggaattgaccaatcaaacccacgaataaatcattaaaatccagattagcgATGCTGGAGTTCttgacattaatgctgcaagaaatgcaatcagtgaattcctgcagatgatgctcacggtttaagcaaagctgcaaaagTAGGTCCGGTTGCAGGGacgcctgcggtgtctttaatcCCACCTAtacgtattgtaaagggtatcggtgaatgtgcaggtaatatttaataatattccttattcaggtgcttctaaccaacattgtggccgttcatctgggcaaactctggggtgtgtcaactcgcaaatatataagtaccagtcaaaagttggacacgtctcatttaattattttattttttatttttttacattggcgattaatattaaaaccatgaaaacgattaattg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191185 True 466 lncRNA 0.37 1 13333927 13334392

Neighbor

gene id symbol gene type direction distance location
LOC103030385 LOC108437225 coding upstream 601559 12708110 ~ 12732368 (+)
LOC103027534 NA coding upstream 869280 12179687 ~ 12464647 (+)
LOC103028579 NA coding upstream 1161461 12132187 ~ 12172466 (+)
LOC103028056 NA coding upstream 1406179 11866450 ~ 11927748 (+)
e2f5 LOC108437220,LOC108268108 coding upstream 1538083 11784077 ~ 11795844 (+)
LOC103030306 NA coding downstream 58985 13393377 ~ 13437203 (+)
rgs20 rgs20,LOC108440656 coding downstream 462002 13796394 ~ 13846951 (+)
LOC103040707 NA coding downstream 531895 13866287 ~ 13882845 (+)
gpr141 NA coding downstream 566516 13900908 ~ 13918612 (+)
LOC103035806 ctnnd2,ctnnd2b,LOC107746909 coding downstream 603893 13938285 ~ 14142611 (+)
G141195 NA non-coding upstream 121573 13136766 ~ 13212354 (+)
G141200 NA non-coding upstream 128664 13204894 ~ 13205263 (+)
G141189 NA non-coding upstream 218909 13099086 ~ 13115018 (+)
G141188 NA non-coding upstream 292656 13040790 ~ 13041271 (+)
G141185 NA non-coding upstream 300334 13030772 ~ 13033593 (+)
G141224 NA non-coding downstream 41363 13375755 ~ 13441640 (+)
G141275 NA non-coding downstream 212002 13546394 ~ 13547636 (+)
G141285 NA non-coding downstream 251436 13585828 ~ 13586433 (+)
G141291 NA non-coding downstream 252960 13587352 ~ 13587825 (+)
G141292 NA non-coding downstream 253698 13588090 ~ 13588459 (+)
LOC103029537 adcyap1b,LOC103029537,LOC108437223,LOC107713980 other upstream 473600 12842798 ~ 12860327 (+)
G141086 NA other upstream 590474 12741473 ~ 12743453 (+)
G140930 NA other upstream 952373 12378996 ~ 12381554 (+)
G140931 NA other upstream 1093302 12237988 ~ 12240625 (+)
LOC111194237 NA other upstream 1855187 11455485 ~ 11478740 (+)
G141361 tcea1 other downstream 521211 13855603 ~ 13858605 (+)
G141410 NA other downstream 846273 14180665 ~ 14200998 (+)
G141495 NA other downstream 1193748 14528140 ~ 14530296 (+)
b4gat1 b4gat1,LOC107747893,LOC107745213,LOC107696735 other downstream 1444789 14779181 ~ 14784812 (+)
G141740 LOC108440267 other downstream 1720265 15054657 ~ 15056973 (+)

Expression


Co-expression Network