G141275


Basic Information

Item Value
gene id G141275
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 13546394 ~ 13547636 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU191254
ccgccatcttgccagtgttGACAGATACCAAGACATGTCCCCACAAATATGACACAAATCTCGTGTGAAGAGGAAAGTGTATCATGTGAAAGAAGCACTCTGGGGCAGGTCTGGACCTTCTCCCACTCGTACTTTACCCTTCAGCCTGGTGAAGCAAGGACACATACCCCATGCCCTGGAGTCATTCATAAAACACAGCAAGAGACACACAGCATGGGCACAGGCAAACTGCATTACACAGCGACATAAAGCCAGAGTCTACCGGACTCTACTTTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191254 True 277 lncRNA 0.49 2 13546394 13547636

Neighbor

gene id symbol gene type direction distance location
LOC103030306 NA coding upstream 109191 13393377 ~ 13437203 (+)
LOC103030385 LOC108437225 coding upstream 814026 12708110 ~ 12732368 (+)
LOC103027534 NA coding upstream 1081747 12179687 ~ 12464647 (+)
LOC103028579 NA coding upstream 1373928 12132187 ~ 12172466 (+)
LOC103028056 NA coding upstream 1618646 11866450 ~ 11927748 (+)
rgs20 rgs20,LOC108440656 coding downstream 248758 13796394 ~ 13846951 (+)
LOC103040707 NA coding downstream 318651 13866287 ~ 13882845 (+)
gpr141 NA coding downstream 353272 13900908 ~ 13918612 (+)
LOC103035806 ctnnd2,ctnnd2b,LOC107746909 coding downstream 390649 13938285 ~ 14142611 (+)
LOC111194316 NA coding downstream 668474 14216110 ~ 14219347 (+)
G141224 NA non-coding upstream 104754 13375755 ~ 13441640 (+)
G141221 NA non-coding upstream 212002 13333927 ~ 13334392 (+)
G141195 NA non-coding upstream 334040 13136766 ~ 13212354 (+)
G141200 NA non-coding upstream 341131 13204894 ~ 13205263 (+)
G141189 NA non-coding upstream 431376 13099086 ~ 13115018 (+)
G141285 NA non-coding downstream 38192 13585828 ~ 13586433 (+)
G141291 NA non-coding downstream 39716 13587352 ~ 13587825 (+)
G141292 NA non-coding downstream 40454 13588090 ~ 13588459 (+)
G141311 NA non-coding downstream 100225 13647861 ~ 13648072 (+)
G141323 atp6v1h non-coding downstream 211047 13758683 ~ 13791358 (+)
LOC103029537 adcyap1b,LOC103029537,LOC108437223,LOC107713980 other upstream 686067 12842798 ~ 12860327 (+)
G141086 NA other upstream 802941 12741473 ~ 12743453 (+)
G140930 NA other upstream 1164840 12378996 ~ 12381554 (+)
G140931 NA other upstream 1305769 12237988 ~ 12240625 (+)
LOC111194237 NA other upstream 2067654 11455485 ~ 11478740 (+)
G141361 tcea1 other downstream 307967 13855603 ~ 13858605 (+)
G141410 NA other downstream 633029 14180665 ~ 14200998 (+)
G141495 NA other downstream 980504 14528140 ~ 14530296 (+)
b4gat1 b4gat1,LOC107747893,LOC107745213,LOC107696735 other downstream 1231545 14779181 ~ 14784812 (+)
G141740 LOC108440267 other downstream 1507021 15054657 ~ 15056973 (+)

Expression


Co-expression Network