G141291


Basic Information

Item Value
gene id G141291
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 13587352 ~ 13587825 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU191273
TATTTTATTTCCACAGCAAAATACTGCACATAAACACTTGATTCCATAATGAGGGGAGAATAACATCTGATGTTACGTAGTTCAGATTCAAGCCCTGTTTTTAAGGACTTCGTCAGCACATTACAAGCTAAGAACactcccacccacacacacacacacacacactttaaacatgTTGAGATTTAAGCCTGTTATACAACCACAGCAGACAGTATTGTCCAGCTGTACTCATAAATATAATAGAGCAGAGGTAATAATaactgtgttgttttgtgttgtatGGTTTTGGATTGTGAGTGTGATGAATGTGTGCAAAAGTGTACATGTAAATGGGATTTTAAATGGACCAGCAAAATGTAGGATTATGGGTCAGTTTTCCCAGactgggattaagcctagtcatcaaaatgctttttttccccaagactaggcttaatccctgtctgggaaactgtccttaaaggagaactccgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191273 True 474 lncRNA 0.39 1 13587352 13587825

Neighbor

gene id symbol gene type direction distance location
LOC103030306 NA coding upstream 150149 13393377 ~ 13437203 (+)
LOC103030385 LOC108437225 coding upstream 854984 12708110 ~ 12732368 (+)
LOC103027534 NA coding upstream 1122705 12179687 ~ 12464647 (+)
LOC103028579 NA coding upstream 1414886 12132187 ~ 12172466 (+)
LOC103028056 NA coding upstream 1659604 11866450 ~ 11927748 (+)
rgs20 rgs20,LOC108440656 coding downstream 208569 13796394 ~ 13846951 (+)
LOC103040707 NA coding downstream 278462 13866287 ~ 13882845 (+)
gpr141 NA coding downstream 313083 13900908 ~ 13918612 (+)
LOC103035806 ctnnd2,ctnnd2b,LOC107746909 coding downstream 350460 13938285 ~ 14142611 (+)
LOC111194316 NA coding downstream 628285 14216110 ~ 14219347 (+)
G141285 NA non-coding upstream 919 13585828 ~ 13586433 (+)
G141275 NA non-coding upstream 39716 13546394 ~ 13547636 (+)
G141224 NA non-coding upstream 145712 13375755 ~ 13441640 (+)
G141221 NA non-coding upstream 252960 13333927 ~ 13334392 (+)
G141195 NA non-coding upstream 374998 13136766 ~ 13212354 (+)
G141292 NA non-coding downstream 265 13588090 ~ 13588459 (+)
G141311 NA non-coding downstream 60036 13647861 ~ 13648072 (+)
G141323 atp6v1h non-coding downstream 170858 13758683 ~ 13791358 (+)
G141324 NA non-coding downstream 205191 13793016 ~ 13849982 (+)
G141329 NA non-coding downstream 238878 13826703 ~ 13831030 (+)
LOC103029537 adcyap1b,LOC103029537,LOC108437223,LOC107713980 other upstream 727025 12842798 ~ 12860327 (+)
G141086 NA other upstream 843899 12741473 ~ 12743453 (+)
G140930 NA other upstream 1205798 12378996 ~ 12381554 (+)
G140931 NA other upstream 1346727 12237988 ~ 12240625 (+)
LOC111194237 NA other upstream 2108612 11455485 ~ 11478740 (+)
G141361 tcea1 other downstream 267778 13855603 ~ 13858605 (+)
G141410 NA other downstream 592840 14180665 ~ 14200998 (+)
G141495 NA other downstream 940315 14528140 ~ 14530296 (+)
b4gat1 b4gat1,LOC107747893,LOC107745213,LOC107696735 other downstream 1191356 14779181 ~ 14784812 (+)
G141740 LOC108440267 other downstream 1466832 15054657 ~ 15056973 (+)

Expression


Co-expression Network