G142348


Basic Information

Item Value
gene id G142348
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 18633047 ~ 18634410 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU192743
aaaatctaaccctacacctaaccctaaccttaacccttaatcaaccataaaatctaaccctacacctaaccctaaccttaacccttaatcaaccctaaaatctaaccctacacctaaccctaaccttaaaccttaatcaaccctaaaatctaaccctacacctaaccctaaccttaaaccttaatcaatcctaaaatctaaccctacaccta

Function

GO:

id name namespace
GO:0048736 appendage development biological_process
GO:0033333 fin development biological_process
GO:0019825 oxygen binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192743 True 212 lncRNA 0.37 2 18633047 18634410

Neighbor

gene id symbol gene type direction distance location
LOC111194332 NA coding upstream 1328956 17235199 ~ 17304091 (+)
rpe65 rpe65,rpe65a,LOC108436856,LOC107705134,LOC107708597,LOC107693590 coding upstream 1628243 16994339 ~ 17004804 (+)
efcab14 efcab14,LOC106569140 coding upstream 1692679 16927428 ~ 16940368 (+)
LOC103044680 NA coding upstream 3133542 15481787 ~ 15499505 (+)
LOC103044992 kcnj10,LOC108440277,LOC107703868,LOC107728032,LOC107692845,LOC102205965 coding upstream 3156832 15443821 ~ 15476215 (+)
LOC103034870 NA coding downstream 119397 18753807 ~ 18785358 (+)
LOC103034112 LOC103034112,LOC108411205,LOC108267323,LOC106599750,LOC105019307,LOC103396312,LOC101066292 coding downstream 160493 18794903 ~ 18816397 (+)
exosc4 exosc4,exos4 coding downstream 187008 18821418 ~ 18826143 (+)
LOC111188235 NA coding downstream 296469 18930879 ~ 18932145 (+)
LOC103047721 NA coding downstream 335476 18969886 ~ 18987441 (+)
G142342 NA non-coding upstream 24537 18606788 ~ 18608510 (+)
G142338 NA non-coding upstream 48150 18584568 ~ 18584897 (+)
G142337 NA non-coding upstream 49285 18583544 ~ 18583762 (+)
G142329 NA non-coding upstream 117482 18458191 ~ 18515565 (+)
G142326 NA non-coding upstream 193108 18439382 ~ 18439939 (+)
G142359 NA non-coding downstream 75028 18709438 ~ 18712415 (+)
G142360 NA non-coding downstream 81169 18715579 ~ 18715796 (+)
G142365 NA non-coding downstream 129648 18764058 ~ 18765703 (+)
G142368 NA non-coding downstream 174467 18808877 ~ 18809481 (+)
G142369 NA non-coding downstream 178568 18812978 ~ 18813382 (+)
G142166 LOC108436878 other upstream 1428554 17203222 ~ 17204493 (+)
G142093 abcf3 other upstream 1559563 17058294 ~ 17073484 (+)
G142067 LOC108436873,LOC108267642,LOC105898987 other upstream 1647752 16972202 ~ 16985295 (+)
LOC103022185 ankrd13c,LOC108436872,LOC105898977 other upstream 1665097 16948382 ~ 16967950 (+)
G141754 pnp5a,LOC108440276,LOC103368940,LOC107747996,LOC107692836,LOC107728028,LOC108267282,LOC107570765,LOC107703870 other upstream 3231143 15385616 ~ 15401904 (+)
G142378 gpaa1 other downstream 221826 18856236 ~ 18893509 (+)
G142384 gpaa1,LOC102780288 other downstream 231040 18865450 ~ 18870317 (+)
G142620 NA other downstream 1101896 19736306 ~ 19868292 (+)
rnf138 NA other downstream 1568238 20202648 ~ 20220149 (+)
G142820 NA other downstream 2148173 20782583 ~ 20790122 (+)

Expression


Co-expression Network