G142365


Basic Information

Item Value
gene id G142365
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 18764058 ~ 18765703 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU192769
tcccctgctcctccagtactgtgagtgtatggaggagctgctgtatggagcagctatcactcaaaagtttggacaccccggcacccCAGTCAGGGCTTTGCAACCACCtattaactgcttagcaaccaccttagcaaccacctggaaaacgttagcaactgcctagcaaccacttagcaacaccttagcaaccacctggaaaatgttagcaactgcctagcaaccacttagcaactactTAACAACCATGTGGAttacattagcaactgcctagcaacagcttagcaaccactttagaaatgatagcaactgtctagcaaccacttagcaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192769 True 332 lncRNA 0.48 3 18764058 18765703

Neighbor

gene id symbol gene type direction distance location
LOC111194332 NA coding upstream 1459967 17235199 ~ 17304091 (+)
rpe65 rpe65,rpe65a,LOC108436856,LOC107705134,LOC107708597,LOC107693590 coding upstream 1759254 16994339 ~ 17004804 (+)
efcab14 efcab14,LOC106569140 coding upstream 1823690 16927428 ~ 16940368 (+)
LOC103044680 NA coding upstream 3264553 15481787 ~ 15499505 (+)
LOC103044992 kcnj10,LOC108440277,LOC107703868,LOC107728032,LOC107692845,LOC102205965 coding upstream 3287843 15443821 ~ 15476215 (+)
LOC103034112 LOC103034112,LOC108411205,LOC108267323,LOC106599750,LOC105019307,LOC103396312,LOC101066292 coding downstream 29200 18794903 ~ 18816397 (+)
exosc4 exosc4,exos4 coding downstream 55715 18821418 ~ 18826143 (+)
LOC111188235 NA coding downstream 165176 18930879 ~ 18932145 (+)
LOC103047721 NA coding downstream 204183 18969886 ~ 18987441 (+)
LOC103046799 mylk4,LOC107671735,LOC107562868 coding downstream 329063 19094766 ~ 19119530 (+)
G142360 NA non-coding upstream 48262 18715579 ~ 18715796 (+)
G142359 NA non-coding upstream 51643 18709438 ~ 18712415 (+)
G142344 NA non-coding upstream 73099 18615188 ~ 18690959 (+)
G142348 NA non-coding upstream 129648 18633047 ~ 18634410 (+)
G142342 NA non-coding upstream 155548 18606788 ~ 18608510 (+)
G142368 NA non-coding downstream 43174 18808877 ~ 18809481 (+)
G142369 NA non-coding downstream 47275 18812978 ~ 18813382 (+)
G142372 NA non-coding downstream 61425 18827128 ~ 18827985 (+)
G142371 NA non-coding downstream 62644 18828347 ~ 18831508 (+)
G142377 NA non-coding downstream 87697 18853400 ~ 18854020 (+)
G142166 LOC108436878 other upstream 1559565 17203222 ~ 17204493 (+)
G142093 abcf3 other upstream 1690574 17058294 ~ 17073484 (+)
G142067 LOC108436873,LOC108267642,LOC105898987 other upstream 1778763 16972202 ~ 16985295 (+)
LOC103022185 ankrd13c,LOC108436872,LOC105898977 other upstream 1796108 16948382 ~ 16967950 (+)
G141754 pnp5a,LOC108440276,LOC103368940,LOC107747996,LOC107692836,LOC107728028,LOC108267282,LOC107570765,LOC107703870 other upstream 3362154 15385616 ~ 15401904 (+)
G142378 gpaa1 other downstream 90533 18856236 ~ 18893509 (+)
G142384 gpaa1,LOC102780288 other downstream 99747 18865450 ~ 18870317 (+)
G142620 NA other downstream 970603 19736306 ~ 19868292 (+)
rnf138 NA other downstream 1436945 20202648 ~ 20220149 (+)
G142820 NA other downstream 2016880 20782583 ~ 20790122 (+)

Expression


Co-expression Network