G142620


Basic Information

Item Value
gene id G142620
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 19736306 ~ 19868292 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU193111
tttttcctttaaaaaggAGCCTCAGGGCTCATGTGTTGTTTGGATTGCCCTTGAGGTGTCCGGTCACCGCGCTGCCGTGGAGGTGTCCCGACCGCAGATGATGCAGGAGCACTGGGTTGAGAGCAAGTGCAGCTGAGCTGCTGTTTTAGCCTCCGTGTCGTGTTTGAATTGTTGAGATTTATGAAGACGTCAGAGTGCGTTCAGTCCATCGCCAGAGGCTCCAACTCCACCGAGGCTTTCACACCAAACCACGCATTAACCCCAGCTCTAATGGAATTCCCCATACGTGCAGGTCTGAACACATCTGGACCCATGCAGAGATTGCCGAGCTTGGAAGGCAGATGGCGGGACCATCCTGGACGCAGTGGGAAGGATAGAGGAGAAAATGCAATGTTGCATCGGGACGTGGCGAAAGAAAGTGGGACCAAAACAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193111 True 435 TUCP 0.53 5 19736306 19868292

Neighbor

gene id symbol gene type direction distance location
LOC111194335 NA coding upstream 305132 19425994 ~ 19431174 (+)
LOC103046799 mylk4,LOC107671735,LOC107562868 coding upstream 616776 19094766 ~ 19119530 (+)
LOC103047721 NA coding upstream 748865 18969886 ~ 18987441 (+)
LOC111188235 NA coding upstream 804161 18930879 ~ 18932145 (+)
exosc4 exosc4,exos4 coding upstream 910163 18821418 ~ 18826143 (+)
ripk1 NA coding downstream 220004 20088296 ~ 20115213 (+)
mep1b LOC108439312 coding downstream 355484 20223776 ~ 20245141 (+)
LOC111194338 LOC108440942,LOC108268057 coding downstream 688474 20556766 ~ 20574038 (+)
LOC111194337 adcy1 coding downstream 743203 20611495 ~ 20667477 (+)
LOC103044091 adcy1,LOC103368946,LOC102227141,LOC107721119 coding downstream 847252 20715544 ~ 20774155 (+)
G142619 NA non-coding upstream 7335 19724445 ~ 19728971 (+)
G142614 NA non-coding upstream 40023 19693936 ~ 19696283 (+)
G142603 NA non-coding upstream 214418 19521677 ~ 19521888 (+)
G142458 NA non-coding upstream 303249 19432674 ~ 19433057 (+)
G142455 NA non-coding upstream 304168 19431431 ~ 19432138 (+)
G142656 NA non-coding downstream 174811 20043103 ~ 20097234 (+)
G142610 NA non-coding downstream 248465 20116757 ~ 20117450 (+)
G142726 NA non-coding downstream 269834 20138126 ~ 20140399 (+)
G142765 NA non-coding downstream 530461 20398753 ~ 20414640 (+)
G142769 phactr1,LOC108239648,LOC107383912 non-coding downstream 541331 20409623 ~ 20434382 (+)
G142378 gpaa1 other upstream 842797 18856236 ~ 18893509 (+)
G142384 gpaa1,LOC102780288 other upstream 865989 18865450 ~ 18870317 (+)
G142166 LOC108436878 other upstream 2531813 17203222 ~ 17204493 (+)
G142093 abcf3 other upstream 2662822 17058294 ~ 17073484 (+)
G142067 LOC108436873,LOC108267642,LOC105898987 other upstream 2751011 16972202 ~ 16985295 (+)
rnf138 NA other downstream 334356 20202648 ~ 20220149 (+)
G142820 NA other downstream 914291 20782583 ~ 20790122 (+)
plag1 plag1,LOC107730125,LOC107698667,LOC107660303,LOC107705642,LOC107570428 other downstream 1700790 21569082 ~ 21579724 (+)
LOC103047556 LOC108436107,LOC108267807 other downstream 1730390 21598682 ~ 21611682 (+)
G143122 LOC108436138 other downstream 1777613 21645905 ~ 21646705 (+)

Expression


Co-expression Network