G142814


Basic Information

Item Value
gene id G142814
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 20701686 ~ 20708499 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU193342
tcctctctctctctctctctctctctctcTCTTTATTTACCCAAAGATGAGGGTGGGCAAGGACTGATACATTTGCCCAGTAGAACTGCTACTTTCCGACTTCAGTTTATTCAGAAATTCCTCACTGGTTCCAGTGACACAGTGTGGATAAAAGTTGTGAGTAAAATTTTGCAAACTGTTGGTCGTTTAGGACTGGATAAAGCATTGTTTTTAttggattttaaaaaattggATCTTTCTGTTTTACCAACGTTTTATAGAGGCCTTTTTAAAATTTGGagtctttttacagtgtatagacAGAGCAGTTTGTCCCTTTATTGGTTATTAGAAGAACCATTAATCTGTGGTGCTCGCTTGGATATTTTTGGCCAACGCTTTTATACCTTTGCCAGGGCGCTGGTTTCTTCTAGAATCGTGAGACTCGGTCAGCTTGTTGGTCTTGTTGGGTCTGATTTTACTGGTGCTGAACGCCTGGCGGAGCTACTGGGGATGCGGTCACTGCGAGTGATGCTCCAACTCCTGCAGAGCTGGAGATCAGTGCTTTCAACTGAAGAGCTGACTCTCCTGAAAGATCATGCTGCAGGAGTTGTTGAGCCTGAGCcgggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193342 True 609 lncRNA 0.44 2 20701686 20708499

Neighbor

gene id symbol gene type direction distance location
LOC111194337 adcy1 coding upstream 34209 20611495 ~ 20667477 (+)
LOC111194338 LOC108440942,LOC108268057 coding upstream 127648 20556766 ~ 20574038 (+)
mep1b LOC108439312 coding upstream 456545 20223776 ~ 20245141 (+)
ripk1 NA coding upstream 586473 20088296 ~ 20115213 (+)
LOC111194335 NA coding upstream 1270512 19425994 ~ 19431174 (+)
LOC103044091 adcy1,LOC103368946,LOC102227141,LOC107721119 coding downstream 7045 20715544 ~ 20774155 (+)
LOC111194340 NA coding downstream 94801 20803300 ~ 20812844 (+)
LOC103041877 camk2d1,LOC107561529,LOC107730106,LOC107698678,LOC108436151,LOC108267517,LOC107732596 coding downstream 180464 20888963 ~ 21008006 (+)
LOC103043942 LOC108436149 coding downstream 625247 21333746 ~ 21338732 (+)
LOC111194246 LOC108436149,LOC108267579 coding downstream 631081 21339580 ~ 21349632 (+)
G142796 NA non-coding upstream 37821 20658901 ~ 20663865 (+)
LOC111194339 NA non-coding upstream 97330 20599666 ~ 20604356 (+)
G142788 NA non-coding upstream 121313 20576709 ~ 20580373 (+)
G142780 NA non-coding upstream 167629 20533791 ~ 20534057 (+)
G142771 NA non-coding upstream 201933 20423422 ~ 20499753 (+)
G142823 NA non-coding downstream 90741 20799240 ~ 20799576 (+)
G142825 NA non-coding downstream 98262 20806761 ~ 20807209 (+)
G142833 NA non-coding downstream 132430 20840929 ~ 20841214 (+)
G142834 NA non-coding downstream 141279 20849778 ~ 20850015 (+)
G142925 NA non-coding downstream 165216 20873715 ~ 20873982 (+)
rnf138 NA other upstream 481537 20202648 ~ 20220149 (+)
G142620 NA other upstream 833394 19736306 ~ 19868292 (+)
G142378 gpaa1 other upstream 1808177 18856236 ~ 18893509 (+)
G142384 gpaa1,LOC102780288 other upstream 1831369 18865450 ~ 18870317 (+)
G142166 LOC108436878 other upstream 3497193 17203222 ~ 17204493 (+)
G142820 NA other downstream 74084 20782583 ~ 20790122 (+)
plag1 plag1,LOC107730125,LOC107698667,LOC107660303,LOC107705642,LOC107570428 other downstream 860583 21569082 ~ 21579724 (+)
LOC103047556 LOC108436107,LOC108267807 other downstream 890183 21598682 ~ 21611682 (+)
G143122 LOC108436138 other downstream 937406 21645905 ~ 21646705 (+)
G143182 mlrn,LOC103039566,LOC106517213,LOC104925296,LOC105008240,LOC106578694 other downstream 1102792 21811291 ~ 21908314 (+)

Expression


Co-expression Network