G142820



Basic Information


Item Value
gene id G142820
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 20782583 ~ 20790122 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU193349
aaacAGCCTTCAACAGAGAACCTCCAGCTTCCAGTCTGAGACTGTGGGATTTTCCTCCATCCACAGAATCATGTACTTTCTTCCCCCCATCGTAGAAGAAGATGAGACTGAGTCGTTCTTTCAGAGAGCTTTGTCTGGGCAAGTGTCTCGGGTTCAGTCTCCTCAGCACGAACTCAGAAGCTCCAAACACTTTATCGGCTACGAGGATCATGAAGCTGCTCCCATCCAATCAGAGGCTCAAGAGAGCTCAGGTCGACAGAAGAGGCTGGACAGTTTTCGCTCCAGCTCGAGTTTGGCTGAGATAACCATGAGGGTCCAAAATGACCTGAGAAAAGAACAAGATGAACCAGCTAGGAGGCAAAGATCTTCAACACAGAGATTATCCAGAAGCTCTTCAGAGATTGCATCCCCACTAGTGGTACAAATGGTCCCCAGGGGGCGCTCTGTTGGAGGCACATCTGATCCTGTACAAAGAACGAGTAAAAAAGCAAAGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU193349 True 494 TUCP 0.49 3 20782583 20790122

Neighbor


gene id symbol gene type direction distance location
LOC103044091 adcy1,LOC103368946,LOC102227141,LOC107721119 coding upstream 8428 20715544 ~ 20774155 (+)
LOC111194337 adcy1 coding upstream 115106 20611495 ~ 20667477 (+)
LOC111194338 LOC108440942,LOC108268057 coding upstream 208545 20556766 ~ 20574038 (+)
mep1b LOC108439312 coding upstream 537442 20223776 ~ 20245141 (+)
ripk1 NA coding upstream 667370 20088296 ~ 20115213 (+)
LOC111194340 NA coding downstream 13178 20803300 ~ 20812844 (+)
LOC103041877 camk2d1,LOC107561529,LOC107730106,LOC107698678,LOC108436151,LOC108267517,LOC107732596 coding downstream 98841 20888963 ~ 21008006 (+)
LOC103043942 LOC108436149 coding downstream 543624 21333746 ~ 21338732 (+)
LOC111194246 LOC108436149,LOC108267579 coding downstream 549458 21339580 ~ 21349632 (+)
penk penk coding downstream 719619 21509741 ~ 21527223 (+)
G142814 NA non-coding upstream 74084 20701686 ~ 20708499 (+)
G142796 NA non-coding upstream 118718 20658901 ~ 20663865 (+)
LOC111194339 NA non-coding upstream 178227 20599666 ~ 20604356 (+)
G142788 NA non-coding upstream 202210 20576709 ~ 20580373 (+)
G142780 NA non-coding upstream 248526 20533791 ~ 20534057 (+)
G142823 NA non-coding downstream 9118 20799240 ~ 20799576 (+)
G142825 NA non-coding downstream 16639 20806761 ~ 20807209 (+)
G142833 NA non-coding downstream 50807 20840929 ~ 20841214 (+)
G142834 NA non-coding downstream 59656 20849778 ~ 20850015 (+)
G142925 NA non-coding downstream 83593 20873715 ~ 20873982 (+)
rnf138 NA other upstream 562434 20202648 ~ 20220149 (+)
G142620 NA other upstream 914291 19736306 ~ 19868292 (+)
G142378 gpaa1 other upstream 1889074 18856236 ~ 18893509 (+)
G142384 gpaa1,LOC102780288 other upstream 1912266 18865450 ~ 18870317 (+)
G142166 LOC108436878 other upstream 3578090 17203222 ~ 17204493 (+)
plag1 plag1,LOC107730125,LOC107698667,LOC107660303,LOC107705642,LOC107570428 other downstream 778960 21569082 ~ 21579724 (+)
LOC103047556 LOC108436107,LOC108267807 other downstream 808560 21598682 ~ 21611682 (+)
G143122 LOC108436138 other downstream 855783 21645905 ~ 21646705 (+)
G143182 mlrn,LOC103039566,LOC106517213,LOC104925296,LOC105008240,LOC106578694 other downstream 1021169 21811291 ~ 21908314 (+)
G143324 NA other downstream 1745563 22535685 ~ 22610447 (+)

Expression



Co-expression Network