G142823


Basic Information

Item Value
gene id G142823
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 20799240 ~ 20799576 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU193353
atttataggtttatgtttgagtaaaatgaacattgttgttttattctataaactacagacaacatttctcccaaatttaaagttcagaaatcaatatttggtggaataaccctggtttttaaatcatcttggcatcatgttctcctccaccagtcttacacactgcttttggataactttatgctgctttactcctggtgcaaaaatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193353 True 208 lncRNA 0.32 2 20799240 20799576

Neighbor

gene id symbol gene type direction distance location
LOC103044091 adcy1,LOC103368946,LOC102227141,LOC107721119 coding upstream 25085 20715544 ~ 20774155 (+)
LOC111194337 adcy1 coding upstream 131763 20611495 ~ 20667477 (+)
LOC111194338 LOC108440942,LOC108268057 coding upstream 225202 20556766 ~ 20574038 (+)
mep1b LOC108439312 coding upstream 554099 20223776 ~ 20245141 (+)
ripk1 NA coding upstream 684027 20088296 ~ 20115213 (+)
LOC111194340 NA coding downstream 3724 20803300 ~ 20812844 (+)
LOC103041877 camk2d1,LOC107561529,LOC107730106,LOC107698678,LOC108436151,LOC108267517,LOC107732596 coding downstream 89387 20888963 ~ 21008006 (+)
LOC103043942 LOC108436149 coding downstream 534170 21333746 ~ 21338732 (+)
LOC111194246 LOC108436149,LOC108267579 coding downstream 540004 21339580 ~ 21349632 (+)
penk penk coding downstream 710165 21509741 ~ 21527223 (+)
G142814 NA non-coding upstream 90741 20701686 ~ 20708499 (+)
G142796 NA non-coding upstream 135375 20658901 ~ 20663865 (+)
LOC111194339 NA non-coding upstream 194884 20599666 ~ 20604356 (+)
G142788 NA non-coding upstream 218867 20576709 ~ 20580373 (+)
G142780 NA non-coding upstream 265183 20533791 ~ 20534057 (+)
G142825 NA non-coding downstream 7185 20806761 ~ 20807209 (+)
G142833 NA non-coding downstream 41353 20840929 ~ 20841214 (+)
G142834 NA non-coding downstream 50202 20849778 ~ 20850015 (+)
G142925 NA non-coding downstream 74139 20873715 ~ 20873982 (+)
G142948 NA non-coding downstream 313679 21113255 ~ 21113653 (+)
G142820 NA other upstream 9118 20782583 ~ 20790122 (+)
rnf138 NA other upstream 579091 20202648 ~ 20220149 (+)
G142620 NA other upstream 930948 19736306 ~ 19868292 (+)
G142378 gpaa1 other upstream 1905731 18856236 ~ 18893509 (+)
G142384 gpaa1,LOC102780288 other upstream 1928923 18865450 ~ 18870317 (+)
plag1 plag1,LOC107730125,LOC107698667,LOC107660303,LOC107705642,LOC107570428 other downstream 769506 21569082 ~ 21579724 (+)
LOC103047556 LOC108436107,LOC108267807 other downstream 799106 21598682 ~ 21611682 (+)
G143122 LOC108436138 other downstream 846329 21645905 ~ 21646705 (+)
G143182 mlrn,LOC103039566,LOC106517213,LOC104925296,LOC105008240,LOC106578694 other downstream 1011715 21811291 ~ 21908314 (+)
G143324 NA other downstream 1736109 22535685 ~ 22610447 (+)

Expression


Co-expression Network