Gene
RNA
| Item | Value |
|---|---|
| gene id | G143642 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 23068374 ~ 23069875 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU194422 | True | 421 | lncRNA | 0.34 | 2 | 23068374 | 23069875 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaa-cgc_2 | NA | coding | upstream | 3016 | 23065287 ~ 23065358 (+) |
| trnat-cgu | NA | coding | upstream | 3275 | 23065028 ~ 23065099 (+) |
| adcyap1 | adcyap1 | coding | upstream | 45962 | 23016781 ~ 23022412 (+) |
| LOC103031382 | NA | coding | upstream | 64380 | 22991462 ~ 23003994 (+) |
| tyms | tyms | coding | upstream | 129115 | 22934665 ~ 22939259 (+) |
| smchd1 | smchd1 | coding | downstream | 120589 | 23190464 ~ 23250746 (+) |
| emilin2 | NA | coding | downstream | 185802 | 23255677 ~ 23290625 (+) |
| LOC103023765 | NA | coding | downstream | 365719 | 23435594 ~ 23442090 (+) |
| LOC103024399 | pde5a,pde5ab | coding | downstream | 502928 | 23572803 ~ 23664047 (+) |
| LOC103024717 | LOC108436153,LOC108267195,LOC107730122,LOC559800,LOC107698664,LOC107559837 | coding | downstream | 640633 | 23710508 ~ 23734928 (+) |
| G143627 | NA | non-coding | upstream | 108154 | 22958268 ~ 22960220 (+) |
| G143626 | NA | non-coding | upstream | 110163 | 22956811 ~ 22958211 (+) |
| G143623 | enosf1,LOC107086472 | non-coding | upstream | 113775 | 22951313 ~ 22954599 (+) |
| G143621 | enosf1 | non-coding | upstream | 126005 | 22939934 ~ 22942369 (+) |
| G143382 | NA | non-coding | upstream | 269546 | 22754052 ~ 22798828 (+) |
| G143674 | NA | non-coding | downstream | 45162 | 23115037 ~ 23115258 (+) |
| G143675 | NA | non-coding | downstream | 60411 | 23130286 ~ 23134140 (+) |
| G143683 | NA | non-coding | downstream | 76176 | 23146051 ~ 23179684 (+) |
| LOC111194182 | NA | non-coding | downstream | 93001 | 23162876 ~ 23164415 (+) |
| LOC111194177 | NA | non-coding | downstream | 100575 | 23170450 ~ 23172359 (+) |
| G143324 | NA | other | upstream | 457927 | 22535685 ~ 22610447 (+) |
| G143182 | mlrn,LOC103039566,LOC106517213,LOC104925296,LOC105008240,LOC106578694 | other | upstream | 1160060 | 21811291 ~ 21908314 (+) |
| G143122 | LOC108436138 | other | upstream | 1421669 | 21645905 ~ 21646705 (+) |
| LOC103047556 | LOC108436107,LOC108267807 | other | upstream | 1456692 | 21598682 ~ 21611682 (+) |
| plag1 | plag1,LOC107730125,LOC107698667,LOC107660303,LOC107705642,LOC107570428 | other | upstream | 1488650 | 21569082 ~ 21579724 (+) |
| LOC111194251 | NA | other | downstream | 315293 | 23385168 ~ 23395240 (+) |
| LOC111194174 | NA | other | downstream | 333813 | 23403688 ~ 23406894 (+) |
| G143836 | NA | other | downstream | 758073 | 23827948 ~ 23916082 (+) |
| ppp3ca | ppp3ca,LOC103369319 | other | downstream | 1366504 | 24436379 ~ 24602402 (+) |
| G144017 | NA | other | downstream | 1637208 | 24707083 ~ 24711533 (+) |
