G143674


Basic Information

Item Value
gene id G143674
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 23115037 ~ 23115258 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU194464
acaaagaactagaaacgtGGCAAAACTATAGCTAGGACGTGACGAGACAGACAACgttggaaggtgcaaagaccgaccgcaaacgtagactaacaggtactatttatactaaacatgaaacaatgaacacctggggagacaggtaacgaggggcggagctacaaattagacacacgtgacggaaaattacaggagaaacacaggggaacagagcgagaCCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194464 True 222 lncRNA 0.46 1 23115037 23115258

Neighbor

gene id symbol gene type direction distance location
trnaa-cgc_2 NA coding upstream 49679 23065287 ~ 23065358 (+)
trnat-cgu NA coding upstream 49938 23065028 ~ 23065099 (+)
adcyap1 adcyap1 coding upstream 92625 23016781 ~ 23022412 (+)
LOC103031382 NA coding upstream 111043 22991462 ~ 23003994 (+)
tyms tyms coding upstream 175778 22934665 ~ 22939259 (+)
smchd1 smchd1 coding downstream 75206 23190464 ~ 23250746 (+)
emilin2 NA coding downstream 140419 23255677 ~ 23290625 (+)
LOC103023765 NA coding downstream 320336 23435594 ~ 23442090 (+)
LOC103024399 pde5a,pde5ab coding downstream 457545 23572803 ~ 23664047 (+)
LOC103024717 LOC108436153,LOC108267195,LOC107730122,LOC559800,LOC107698664,LOC107559837 coding downstream 595250 23710508 ~ 23734928 (+)
G143642 NA non-coding upstream 45162 23068374 ~ 23069875 (+)
G143627 NA non-coding upstream 154817 22958268 ~ 22960220 (+)
G143626 NA non-coding upstream 156826 22956811 ~ 22958211 (+)
G143623 enosf1,LOC107086472 non-coding upstream 160438 22951313 ~ 22954599 (+)
G143621 enosf1 non-coding upstream 172668 22939934 ~ 22942369 (+)
G143675 NA non-coding downstream 15028 23130286 ~ 23134140 (+)
G143683 NA non-coding downstream 30793 23146051 ~ 23179684 (+)
LOC111194182 NA non-coding downstream 47618 23162876 ~ 23164415 (+)
LOC111194177 NA non-coding downstream 55192 23170450 ~ 23172359 (+)
G143691 NA non-coding downstream 55338 23170596 ~ 23173788 (+)
G143324 NA other upstream 504590 22535685 ~ 22610447 (+)
G143182 mlrn,LOC103039566,LOC106517213,LOC104925296,LOC105008240,LOC106578694 other upstream 1206723 21811291 ~ 21908314 (+)
G143122 LOC108436138 other upstream 1468332 21645905 ~ 21646705 (+)
LOC103047556 LOC108436107,LOC108267807 other upstream 1503355 21598682 ~ 21611682 (+)
plag1 plag1,LOC107730125,LOC107698667,LOC107660303,LOC107705642,LOC107570428 other upstream 1535313 21569082 ~ 21579724 (+)
LOC111194251 NA other downstream 269910 23385168 ~ 23395240 (+)
LOC111194174 NA other downstream 288430 23403688 ~ 23406894 (+)
G143836 NA other downstream 712690 23827948 ~ 23916082 (+)
ppp3ca ppp3ca,LOC103369319 other downstream 1321121 24436379 ~ 24602402 (+)
G144017 NA other downstream 1591825 24707083 ~ 24711533 (+)

Expression


Co-expression Network