Gene
RNA
| Item | Value |
|---|---|
| gene id | G143691 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 23170596 ~ 23173788 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU194491 | True | 364 | lncRNA | 0.44 | 3 | 23170596 | 23173788 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaa-cgc_2 | NA | coding | upstream | 105238 | 23065287 ~ 23065358 (+) |
| trnat-cgu | NA | coding | upstream | 105497 | 23065028 ~ 23065099 (+) |
| adcyap1 | adcyap1 | coding | upstream | 148184 | 23016781 ~ 23022412 (+) |
| LOC103031382 | NA | coding | upstream | 166602 | 22991462 ~ 23003994 (+) |
| tyms | tyms | coding | upstream | 231337 | 22934665 ~ 22939259 (+) |
| smchd1 | smchd1 | coding | downstream | 16676 | 23190464 ~ 23250746 (+) |
| emilin2 | NA | coding | downstream | 81889 | 23255677 ~ 23290625 (+) |
| LOC103023765 | NA | coding | downstream | 261806 | 23435594 ~ 23442090 (+) |
| LOC103024399 | pde5a,pde5ab | coding | downstream | 399015 | 23572803 ~ 23664047 (+) |
| LOC103024717 | LOC108436153,LOC108267195,LOC107730122,LOC559800,LOC107698664,LOC107559837 | coding | downstream | 536720 | 23710508 ~ 23734928 (+) |
| LOC111194182 | NA | non-coding | upstream | 6181 | 23162876 ~ 23164415 (+) |
| G143675 | NA | non-coding | upstream | 36456 | 23130286 ~ 23134140 (+) |
| G143674 | NA | non-coding | upstream | 55338 | 23115037 ~ 23115258 (+) |
| G143642 | NA | non-coding | upstream | 100721 | 23068374 ~ 23069875 (+) |
| G143627 | NA | non-coding | upstream | 210376 | 22958268 ~ 22960220 (+) |
| LOC111194181 | NA | non-coding | downstream | 7929 | 23181717 ~ 23185264 (+) |
| G143694 | NA | non-coding | downstream | 13240 | 23187028 ~ 23189236 (+) |
| G143684 | NA | non-coding | downstream | 117524 | 23291312 ~ 23291924 (+) |
| G143698 | NA | non-coding | downstream | 119204 | 23292992 ~ 23293214 (+) |
| G143699 | NA | non-coding | downstream | 120278 | 23294066 ~ 23294388 (+) |
| G143324 | NA | other | upstream | 560149 | 22535685 ~ 22610447 (+) |
| G143182 | mlrn,LOC103039566,LOC106517213,LOC104925296,LOC105008240,LOC106578694 | other | upstream | 1262282 | 21811291 ~ 21908314 (+) |
| G143122 | LOC108436138 | other | upstream | 1523891 | 21645905 ~ 21646705 (+) |
| LOC103047556 | LOC108436107,LOC108267807 | other | upstream | 1558914 | 21598682 ~ 21611682 (+) |
| plag1 | plag1,LOC107730125,LOC107698667,LOC107660303,LOC107705642,LOC107570428 | other | upstream | 1590872 | 21569082 ~ 21579724 (+) |
| LOC111194251 | NA | other | downstream | 211380 | 23385168 ~ 23395240 (+) |
| LOC111194174 | NA | other | downstream | 229900 | 23403688 ~ 23406894 (+) |
| G143836 | NA | other | downstream | 654160 | 23827948 ~ 23916082 (+) |
| ppp3ca | ppp3ca,LOC103369319 | other | downstream | 1262591 | 24436379 ~ 24602402 (+) |
| G144017 | NA | other | downstream | 1533295 | 24707083 ~ 24711533 (+) |
