G143698


Basic Information

Item Value
gene id G143698
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 23292992 ~ 23293214 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU194502
GTGCTGTAATTTCTTTTGCTATTTGTGCTGTTGCTTGTTCATTTACTGAATGTTGGTTCTGGATTCTAAATACCACTAGTGTAGCATCTAGTAAATGTTTGACCTGGTTTTAAACTTACGACGTCTTGTTGCCTTTGGTCAGCTCCTGAATGACCTCTCCTTTAGGGTTTACTGTGAATATGCGGCATGTTGGAACGTGCACATGCTTATAGGCAAAGACGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194502 True 223 lncRNA 0.41 1 23292992 23293214

Neighbor

gene id symbol gene type direction distance location
emilin2 NA coding upstream 2367 23255677 ~ 23290625 (+)
smchd1 smchd1 coding upstream 42246 23190464 ~ 23250746 (+)
trnaa-cgc_2 NA coding upstream 227634 23065287 ~ 23065358 (+)
trnat-cgu NA coding upstream 227893 23065028 ~ 23065099 (+)
adcyap1 adcyap1 coding upstream 270580 23016781 ~ 23022412 (+)
LOC103023765 NA coding downstream 142380 23435594 ~ 23442090 (+)
LOC103024399 pde5a,pde5ab coding downstream 279589 23572803 ~ 23664047 (+)
LOC103024717 LOC108436153,LOC108267195,LOC107730122,LOC559800,LOC107698664,LOC107559837 coding downstream 417294 23710508 ~ 23734928 (+)
LOC103035300 cacnb2,LOC102289395 coding downstream 487038 23780252 ~ 23905504 (+)
arl5b arl5b,LOC103034648,LOC100708858,LOC107591025,LOC103373092 coding downstream 652889 23946103 ~ 23971572 (+)
G143684 NA non-coding upstream 1068 23291312 ~ 23291924 (+)
G143694 NA non-coding upstream 103756 23187028 ~ 23189236 (+)
LOC111194181 NA non-coding upstream 107728 23181717 ~ 23185264 (+)
LOC111194176 NA non-coding upstream 118192 23172948 ~ 23174800 (+)
G143691 NA non-coding upstream 119204 23170596 ~ 23173788 (+)
G143699 NA non-coding downstream 852 23294066 ~ 23294388 (+)
G143701 NA non-coding downstream 2259 23295473 ~ 23295859 (+)
G143702 NA non-coding downstream 4596 23297810 ~ 23298390 (+)
G143707 NA non-coding downstream 13847 23307061 ~ 23312468 (+)
G143751 NA non-coding downstream 30098 23323312 ~ 23387571 (+)
G143324 NA other upstream 682545 22535685 ~ 22610447 (+)
G143182 mlrn,LOC103039566,LOC106517213,LOC104925296,LOC105008240,LOC106578694 other upstream 1384678 21811291 ~ 21908314 (+)
G143122 LOC108436138 other upstream 1646287 21645905 ~ 21646705 (+)
LOC103047556 LOC108436107,LOC108267807 other upstream 1681310 21598682 ~ 21611682 (+)
plag1 plag1,LOC107730125,LOC107698667,LOC107660303,LOC107705642,LOC107570428 other upstream 1713268 21569082 ~ 21579724 (+)
LOC111194251 NA other downstream 91954 23385168 ~ 23395240 (+)
LOC111194174 NA other downstream 110474 23403688 ~ 23406894 (+)
G143836 NA other downstream 534734 23827948 ~ 23916082 (+)
ppp3ca ppp3ca,LOC103369319 other downstream 1143165 24436379 ~ 24602402 (+)
G144017 NA other downstream 1413869 24707083 ~ 24711533 (+)

Expression


Co-expression Network