G41452


Basic Information

Item Value
gene id G41452
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 2436404 ~ 2436629 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47060
CATTAACCATTGTCATACTGTAGTGCTGTATAAAGCACAGCTTACACAGAAGTCACTTTCAAACTAAGAAGCCTCCTGTTGATCATTGTGGCGAAATTGATTGACCAACTTGATCCCAATGTAAAATTTGCATGGGGAAATCTTTTGCCCTCTTGTGAAATTCCCAATCGCTTGAATTCCTGATGAAATTATTGTATTTTGCCTGCAAAAATGTCCAGAACAATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47060 True 226 lncRNA 0.29 1 2436404 2436629

Neighbor

gene id symbol gene type direction distance location
CI01000006_02396895_02399927 CXXC5A, CXXC5 coding upstream 36453 2396468 ~ 2399951 (+)
CI01000006_02374902_02382000 NA coding upstream 54003 2374832 ~ 2382401 (+)
CI01000006_02274089_02276641 NA coding upstream 159723 2273891 ~ 2276681 (+)
CI01000006_02241091_02259573 NA coding upstream 176765 2241091 ~ 2259639 (+)
CI01000006_02181904_02185719 NA coding upstream 250112 2180910 ~ 2186292 (+)
CI01000006_02490349_02491048 NA coding downstream 53720 2490349 ~ 2491118 (+)
CI01000006_02531899_02588907 NRG2A coding downstream 95187 2531816 ~ 2589763 (+)
CI01000006_02613864_02614742 NA coding downstream 177125 2613754 ~ 2614760 (+)
CI01000006_02616480_02616828 NA coding downstream 179851 2616480 ~ 2616839 (+)
CI01000006_02665949_02677083 RASGRP2 coding downstream 229320 2665949 ~ 2677215 (+)
G41449 NA non-coding upstream 5267 2430824 ~ 2431137 (+)
G41441 NA non-coding upstream 21823 2414351 ~ 2414581 (+)
G41440 NA non-coding upstream 57777 2378330 ~ 2378627 (+)
G41387 NA non-coding upstream 163135 2273046 ~ 2273269 (+)
G41344 NA non-coding upstream 167140 2267329 ~ 2269264 (+)
G41453 NA non-coding downstream 601 2437230 ~ 2437452 (+)
G41457 NA non-coding downstream 5983 2442612 ~ 2442976 (+)
G41461 NA non-coding downstream 9095 2445724 ~ 2445934 (+)
G41423 NA non-coding downstream 173602 2610231 ~ 2626186 (+)
G41482 NA non-coding downstream 195585 2632214 ~ 2632830 (+)
G41170 NA other upstream 740583 1692065 ~ 1695821 (+)
G40768 NA other upstream 1943378 488407 ~ 493026 (+)
G40767 NA other upstream 1953069 360009 ~ 484185 (+)
G40772 NA other upstream 1957210 475465 ~ 479194 (+)
G41424 NA other downstream 209033 2645662 ~ 2660570 (+)
G41591 NA other downstream 399538 2836167 ~ 2839421 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 1292601 3734554 ~ 3736035 (+)
G41996 NA other downstream 2680577 5117206 ~ 5124149 (+)
G43896 NA other downstream 3333460 5770089 ~ 5771775 (+)

Expression


Co-expression Network