G144113


Basic Information

Item Value
gene id G144113
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 24850890 ~ 24851126 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU194993
aaagccagccaaaccgccatgcaggtaggctcagcctggccccgcccactcagcgctctcctcgagtcgacacgcctctacctcaggagatttgtgttgagtgatatttttttacactctgtttatttaagaaaaacttgcatttgaattgcactgaaaggaagacaattccttattttttattgtttttccaaatgacaattctattaaaaaaaagaaacaaagaactagaaaaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194993 True 237 lncRNA 0.40 1 24850890 24851126

Neighbor

gene id symbol gene type direction distance location
LOC103035573 NA coding upstream 37136 24810977 ~ 24813754 (+)
LOC103035878 NA coding upstream 47904 24783105 ~ 24802986 (+)
LOC103037427 NA coding upstream 69698 24769347 ~ 24781192 (+)
LOC103036193 ybx2 coding upstream 117117 24713729 ~ 24733773 (+)
gps2 gps2,LOC106608669 coding upstream 146462 24693102 ~ 24704428 (+)
LOC103033974 NA coding downstream 44487 24895613 ~ 24911351 (+)
LOC103047006 NA coding downstream 82245 24933371 ~ 24949400 (+)
LOC103032175 LOC103032175,LOC108440822,LOC108242286,LOC106526854,LOC103359706,LOC107731898,LOC107679257 coding downstream 155896 25007022 ~ 25037257 (+)
LOC103031648 NA coding downstream 200909 25052035 ~ 25073701 (+)
eml3 eml3,LOC107558446,LOC107731903,LOC107679271,LOC107709062 coding downstream 238705 25089831 ~ 25170403 (+)
G144038 NA non-coding upstream 34806 24815864 ~ 24816084 (+)
G144014 NA non-coding upstream 160715 24689795 ~ 24690175 (+)
G144000 NA non-coding upstream 422392 24428062 ~ 24428498 (+)
G143973 NA non-coding upstream 567740 24282034 ~ 24283150 (+)
G143964 NA non-coding upstream 661008 24189634 ~ 24189882 (+)
G144125 NA non-coding downstream 66560 24917686 ~ 24917987 (+)
G144132 NA non-coding downstream 84699 24935825 ~ 24936380 (+)
G144134 NA non-coding downstream 85289 24936415 ~ 24936800 (+)
G144139 map4k2 non-coding downstream 107585 24958711 ~ 24959188 (+)
G144160 NA non-coding downstream 225170 25076296 ~ 25080337 (+)
G144017 NA other upstream 139357 24707083 ~ 24711533 (+)
ppp3ca ppp3ca,LOC103369319 other upstream 248488 24436379 ~ 24602402 (+)
G143836 NA other upstream 934808 23827948 ~ 23916082 (+)
LOC111194174 NA other upstream 1443996 23403688 ~ 23406894 (+)
LOC111194251 NA other upstream 1455650 23385168 ~ 23395240 (+)
LOC111188189 NA other downstream 5646 24856772 ~ 24876737 (+)
LOC111194253 NA other downstream 41866 24892992 ~ 24894553 (+)
G144146 men1,LOC107660721 other downstream 147647 24998773 ~ 25004171 (+)
G144270 peli3,LOC103027529,LOC108440836,LOC108267165,LOC107660729,LOC107731914,LOC107679255 other downstream 524872 25375998 ~ 25378765 (+)
G144290 NA other downstream 620997 25472123 ~ 25474694 (+)

Expression


Co-expression Network