G144134


Basic Information

Item Value
gene id G144134
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 24936415 ~ 24936800 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU195036
ggctccttcctacctgcactcactcctgaaggcttacgctacctcccggccgctgcgctcctccaatgaacgtcgcctcgctttgccaaacactcacacaaagcaatccagactgttctcatacagagttccccaatggtggaacaaactaccttccactaccagatcaggagaatctctcgctatctttaagaaactcctgaagacagaactcttcaaagagcacttactctcctaacacctctaacaaactaactaattctaacctcatctccttcttcctcttctctactcctctatcccattatttccctctgacctccttaaggccctatctatagatgctttatttttaacttctattattttgtacttaacctcttcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195036 True 386 lncRNA 0.45 1 24936415 24936800

Neighbor

gene id symbol gene type direction distance location
LOC103033974 NA coding upstream 25064 24895613 ~ 24911351 (+)
LOC103035573 NA coding upstream 122661 24810977 ~ 24813754 (+)
LOC103035878 NA coding upstream 133429 24783105 ~ 24802986 (+)
LOC103037427 NA coding upstream 155223 24769347 ~ 24781192 (+)
LOC103036193 ybx2 coding upstream 202642 24713729 ~ 24733773 (+)
LOC103032175 LOC103032175,LOC108440822,LOC108242286,LOC106526854,LOC103359706,LOC107731898,LOC107679257 coding downstream 70222 25007022 ~ 25037257 (+)
LOC103031648 NA coding downstream 115235 25052035 ~ 25073701 (+)
eml3 eml3,LOC107558446,LOC107731903,LOC107679271,LOC107709062 coding downstream 153031 25089831 ~ 25170403 (+)
mta2 mta2,LOC107731904,LOC107679264,LOC107558444,LOC107660724 coding downstream 235238 25172038 ~ 25204911 (+)
LOC103030689 LOC103030689,LOC108440851,LOC108268299 coding downstream 270857 25207657 ~ 25210088 (+)
G144132 NA non-coding upstream 35 24935825 ~ 24936380 (+)
G144125 NA non-coding upstream 18428 24917686 ~ 24917987 (+)
G144113 NA non-coding upstream 85289 24850890 ~ 24851126 (+)
G144038 NA non-coding upstream 120331 24815864 ~ 24816084 (+)
G144014 NA non-coding upstream 246240 24689795 ~ 24690175 (+)
G144139 map4k2 non-coding downstream 21911 24958711 ~ 24959188 (+)
G144160 NA non-coding downstream 139496 25076296 ~ 25080337 (+)
G144164 ecsit non-coding downstream 145838 25082638 ~ 25087483 (+)
G144169 NA non-coding downstream 191494 25128294 ~ 25128684 (+)
G144170 NA non-coding downstream 199938 25136738 ~ 25137486 (+)
LOC111194253 NA other upstream 41862 24892992 ~ 24894553 (+)
LOC111188189 NA other upstream 59678 24856772 ~ 24876737 (+)
G144017 NA other upstream 224882 24707083 ~ 24711533 (+)
ppp3ca ppp3ca,LOC103369319 other upstream 334013 24436379 ~ 24602402 (+)
G143836 NA other upstream 1020333 23827948 ~ 23916082 (+)
G144146 men1,LOC107660721 other downstream 61973 24998773 ~ 25004171 (+)
G144270 peli3,LOC103027529,LOC108440836,LOC108267165,LOC107660729,LOC107731914,LOC107679255 other downstream 439198 25375998 ~ 25378765 (+)
G144290 NA other downstream 535323 25472123 ~ 25474694 (+)
G144333 NA other downstream 716206 25653006 ~ 25654250 (+)
G144372 NA other downstream 849937 25786737 ~ 25788842 (+)

Expression


Co-expression Network