G144139 (map4k2)


Basic Information

Item Value
gene id G144139
gene name map4k2
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 24958711 ~ 24959188 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU195043
GTGATAAGTGACTCTGCTTCTTCTGTAAGTGTCCGCGCTGCTCAAACAGAGCTGTCAAACGATGAGAGTAAAGCTGAGATGATTTCCCAGAGACAGACATAAGGACGTTGTTCATGACATACAGCCAGGTACATCTCTGCGGAAGCAACTTTTCCAAAGTGTCCTCATGAAGCTCGTTTAAGTTGAGTATGTAGACCCCCTCTTCTGCTCC

Function

symbol description
map4k2 Predicted to enable MAP kinase kinase kinase kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MAP4K2 (mitogen-activated protein kinase kinase kinase kinase 2).

NR:

description
mitogen-activated protein kinase kinase kinase kinase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195043 True 211 lncRNA 0.46 3 24958711 24959188

Neighbor

gene id symbol gene type direction distance location
LOC103047006 NA coding upstream 9311 24933371 ~ 24949400 (+)
LOC103033974 NA coding upstream 47360 24895613 ~ 24911351 (+)
LOC103035573 NA coding upstream 144957 24810977 ~ 24813754 (+)
LOC103035878 NA coding upstream 155725 24783105 ~ 24802986 (+)
LOC103037427 NA coding upstream 177519 24769347 ~ 24781192 (+)
LOC103032175 LOC103032175,LOC108440822,LOC108242286,LOC106526854,LOC103359706,LOC107731898,LOC107679257 coding downstream 47834 25007022 ~ 25037257 (+)
LOC103031648 NA coding downstream 92847 25052035 ~ 25073701 (+)
eml3 eml3,LOC107558446,LOC107731903,LOC107679271,LOC107709062 coding downstream 130643 25089831 ~ 25170403 (+)
mta2 mta2,LOC107731904,LOC107679264,LOC107558444,LOC107660724 coding downstream 212850 25172038 ~ 25204911 (+)
LOC103030689 LOC103030689,LOC108440851,LOC108268299 coding downstream 248469 25207657 ~ 25210088 (+)
G144134 NA non-coding upstream 21911 24936415 ~ 24936800 (+)
G144132 NA non-coding upstream 22331 24935825 ~ 24936380 (+)
G144125 NA non-coding upstream 40724 24917686 ~ 24917987 (+)
G144113 NA non-coding upstream 107585 24850890 ~ 24851126 (+)
G144038 NA non-coding upstream 142627 24815864 ~ 24816084 (+)
G144160 NA non-coding downstream 117108 25076296 ~ 25080337 (+)
G144164 ecsit non-coding downstream 123450 25082638 ~ 25087483 (+)
G144169 NA non-coding downstream 169106 25128294 ~ 25128684 (+)
G144170 NA non-coding downstream 177550 25136738 ~ 25137486 (+)
G144174 NA non-coding downstream 268135 25227323 ~ 25229137 (+)
LOC111194253 NA other upstream 64158 24892992 ~ 24894553 (+)
LOC111188189 NA other upstream 81974 24856772 ~ 24876737 (+)
G144017 NA other upstream 247178 24707083 ~ 24711533 (+)
ppp3ca ppp3ca,LOC103369319 other upstream 356309 24436379 ~ 24602402 (+)
G143836 NA other upstream 1042629 23827948 ~ 23916082 (+)
G144146 men1,LOC107660721 other downstream 39585 24998773 ~ 25004171 (+)
G144270 peli3,LOC103027529,LOC108440836,LOC108267165,LOC107660729,LOC107731914,LOC107679255 other downstream 416810 25375998 ~ 25378765 (+)
G144290 NA other downstream 512935 25472123 ~ 25474694 (+)
G144333 NA other downstream 693818 25653006 ~ 25654250 (+)
G144372 NA other downstream 827549 25786737 ~ 25788842 (+)

Expression


Co-expression Network