G144170


Basic Information

Item Value
gene id G144170
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 25136738 ~ 25137486 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU195086
TCTGCATGTGGAACTTTCGGTTTAATCTATTAATCAGTGCATTTTACatatttcttgatttttgacTAACTGCTCTttcctgtgagtgtgtgtgtttgtgtgtgtgtgtatgtgtggtttgtTGGCTatgtattagggctgcacgatatgggaaaaatctgaCATTGCAATgaacgaaaaaaaaatcttttttcaacTATATATATTGAGATATCAAACAATGCAGAGCCCATaatgtcaccagccccgccccacaCGCGTGCTGTCTCGCGTCCGGAGTCAGCACAGAGCActtaaaaccagagaaaccagcaaaacaacagtaatcgaccctttaaatgttttttttaaaggtaaataagagcgaattcagctgtaactggaaatatctgcgcaaaactgtgctggactgaggtgcacagctttcgacacatgcgtttacaagcacatgcccaaccatttggatggaggccatgcggttaccttgtgtttaatCCTGCTCCCTCCCcctcgcgcttctcaggcagcagcagcctgtcacttactcagacacagagacagcgctgtgtatctacttcttgtgtcaagaatcaaattATTGCAACATgtcgtgtttgatttaattgccttaaatgACActgcacgtcctgcgatgtgactattgcgcatgcgcacatcgcgaTGACGATGTTTAAaagatatatcgtgcagccctactgtgTATACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195086 True 727 lncRNA 0.43 2 25136738 25137486

Neighbor

gene id symbol gene type direction distance location
LOC103031648 NA coding upstream 63037 25052035 ~ 25073701 (+)
LOC103032175 LOC103032175,LOC108440822,LOC108242286,LOC106526854,LOC103359706,LOC107731898,LOC107679257 coding upstream 99481 25007022 ~ 25037257 (+)
LOC103047006 NA coding upstream 187338 24933371 ~ 24949400 (+)
LOC103033974 NA coding upstream 225387 24895613 ~ 24911351 (+)
LOC103035573 NA coding upstream 322984 24810977 ~ 24813754 (+)
mta2 mta2,LOC107731904,LOC107679264,LOC107558444,LOC107660724 coding downstream 34552 25172038 ~ 25204911 (+)
LOC103030689 LOC103030689,LOC108440851,LOC108268299 coding downstream 70171 25207657 ~ 25210088 (+)
taf6l taf6l,LOC107731936,LOC107709373 coding downstream 73103 25210589 ~ 25217909 (+)
LOC103028801 NA coding downstream 106420 25243906 ~ 25324523 (+)
LOC103046088 NA coding downstream 193789 25331275 ~ 25353142 (+)
G144169 NA non-coding upstream 8054 25128294 ~ 25128684 (+)
G144164 ecsit non-coding upstream 49255 25082638 ~ 25087483 (+)
G144160 NA non-coding upstream 56401 25076296 ~ 25080337 (+)
G144139 map4k2 non-coding upstream 177550 24958711 ~ 24959188 (+)
G144134 NA non-coding upstream 199938 24936415 ~ 24936800 (+)
G144174 NA non-coding downstream 89837 25227323 ~ 25229137 (+)
G144278 NA non-coding downstream 250611 25388097 ~ 25401731 (+)
G144276 NA non-coding downstream 307408 25444894 ~ 25446699 (+)
G144292 NA non-coding downstream 365973 25503459 ~ 25503798 (+)
G144293 NA non-coding downstream 366399 25503885 ~ 25504135 (+)
G144146 men1,LOC107660721 other upstream 132567 24998773 ~ 25004171 (+)
LOC111194253 NA other upstream 242185 24892992 ~ 24894553 (+)
LOC111188189 NA other upstream 260001 24856772 ~ 24876737 (+)
G144017 NA other upstream 425205 24707083 ~ 24711533 (+)
ppp3ca ppp3ca,LOC103369319 other upstream 534336 24436379 ~ 24602402 (+)
G144270 peli3,LOC103027529,LOC108440836,LOC108267165,LOC107660729,LOC107731914,LOC107679255 other downstream 238512 25375998 ~ 25378765 (+)
G144290 NA other downstream 334637 25472123 ~ 25474694 (+)
G144333 NA other downstream 515520 25653006 ~ 25654250 (+)
G144372 NA other downstream 649251 25786737 ~ 25788842 (+)
G144584 NA other downstream 1613349 26750835 ~ 26754442 (+)

Expression


Co-expression Network