G41461


Basic Information

Item Value
gene id G41461
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 2445724 ~ 2445934 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47069
TATGATGCCAATATCGAGTTCTCTTTCGCGCTTGAACAAACAATAACACGTAATTATGCCAAAATGCCCATTTTGTCAAGTATCCTCATTAGAGCAGTCTTATGAGTTAAATAACATCTTAAAGGGTTAGTTCACCCAAAAATGAAAATTATATCATTTATTACTCACCCTCATGTTGTTACACATCTGTAAGACATTCGTTCATCTTCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47069 True 211 lncRNA 0.37 1 2445724 2445934

Neighbor

gene id symbol gene type direction distance location
CI01000006_02396895_02399927 CXXC5A, CXXC5 coding upstream 45773 2396468 ~ 2399951 (+)
CI01000006_02374902_02382000 NA coding upstream 63323 2374832 ~ 2382401 (+)
CI01000006_02274089_02276641 NA coding upstream 169043 2273891 ~ 2276681 (+)
CI01000006_02241091_02259573 NA coding upstream 186085 2241091 ~ 2259639 (+)
CI01000006_02181904_02185719 NA coding upstream 259432 2180910 ~ 2186292 (+)
CI01000006_02490349_02491048 NA coding downstream 44415 2490349 ~ 2491118 (+)
CI01000006_02531899_02588907 NRG2A coding downstream 85882 2531816 ~ 2589763 (+)
CI01000006_02613864_02614742 NA coding downstream 167820 2613754 ~ 2614760 (+)
CI01000006_02616480_02616828 NA coding downstream 170546 2616480 ~ 2616839 (+)
CI01000006_02665949_02677083 RASGRP2 coding downstream 220015 2665949 ~ 2677215 (+)
G41457 NA non-coding upstream 2748 2442612 ~ 2442976 (+)
G41453 NA non-coding upstream 8272 2437230 ~ 2437452 (+)
G41452 NA non-coding upstream 9095 2436404 ~ 2436629 (+)
G41449 NA non-coding upstream 14587 2430824 ~ 2431137 (+)
G41441 NA non-coding upstream 31143 2414351 ~ 2414581 (+)
G41423 NA non-coding downstream 164297 2610231 ~ 2626186 (+)
G41482 NA non-coding downstream 186280 2632214 ~ 2632830 (+)
G41433 NA non-coding downstream 188169 2634103 ~ 2644385 (+)
G41488 NA non-coding downstream 254673 2700607 ~ 2700826 (+)
G41494 NA non-coding downstream 263592 2709526 ~ 2710015 (+)
G41170 NA other upstream 749903 1692065 ~ 1695821 (+)
G40768 NA other upstream 1952698 488407 ~ 493026 (+)
G40767 NA other upstream 1962389 360009 ~ 484185 (+)
G40772 NA other upstream 1966530 475465 ~ 479194 (+)
G41424 NA other downstream 199728 2645662 ~ 2660570 (+)
G41591 NA other downstream 390233 2836167 ~ 2839421 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 1283296 3734554 ~ 3736035 (+)
G41996 NA other downstream 2671272 5117206 ~ 5124149 (+)
G43896 NA other downstream 3324155 5770089 ~ 5771775 (+)

Expression


Co-expression Network